Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC005522.1-201ENST00000395416 346 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL391361.1-201ENST00000405580 489 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 RNU6-272P-201ENST00000411028 104 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC138761.5-201ENST00000433967 325 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL596266.1-201ENST00000448132 400 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC239809.1-201ENST00000450470 217 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC233982.1-201ENST00000451247 436 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC005410.1-202ENST00000460347 485 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 EIF3LP3-201ENST00000495197 822 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 RPS17P5-201ENST00000498293 408 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 PRELID3BP5-201ENST00000508612 460 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 RN7SKP253-201ENST00000516424 309 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 VN1R83P-201ENST00000595685 445 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC113368.1-201ENST00000603736 382 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC011453.2-201ENST00000603737 729 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC016877.3-201ENST00000606778 504 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AP005137.2-201ENST00000609238 400 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC079395.2-201ENST00000610982 737 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC109809.1-201ENST00000619665 545 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC015804.1-201ENST00000622935 435 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 FRG1EP-201ENST00000634469 770 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 MRRFP1-201ENST00000435941 1675 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC004656.1-201ENST00000568479 4951 ntBASIC6.23□□□□□ -1.41
COL4A3BPQ9Y5P4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 HMGB1P5-201ENST00000255320 642 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 RNU6-575P-201ENST00000411326 105 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 MTCO1P3-201ENST00000429327 192 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 VDAC2P4-201ENST00000452925 711 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 RPS26P39-201ENST00000469206 341 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC021146.5-201ENST00000503544 545 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC018552.3-201ENST00000567416 561 ntBASIC6.22□□□□□ -1.41
COL4A3BPQ9Y5P4 AC015720.2-201ENST00000567709 334 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms