Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC00888-204ENST00000487386 421 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SL284P-201ENST00000498823 275 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC048346.1-201ENST00000510247 144 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC079395.1-201ENST00000510981 262 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 SNORA70.20-201ENST00000516848 126 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 ELOCP32-201ENST00000548625 324 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC018552.1-201ENST00000562099 811 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 PIGPP4-201ENST00000584447 307 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC121247.2-201ENST00000604776 136 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC080013.6-201ENST00000606185 215 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AL355816.1-201ENST00000607951 118 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC124312.6-202ENST00000623624 418 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDHGA6Q9Y5G7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 CASC19-204ENST00000641001 2055 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AP000776.1-201ENST00000530032 1663 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RNU6-1066P-201ENST00000363573 105 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RNU6-272P-201ENST00000411028 104 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AL390023.1-201ENST00000428836 262 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AL109741.2-201ENST00000455561 343 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC074386.1-201ENST00000476560 767 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RPL7P18-201ENST00000478965 734 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 TRBV5-2-201ENST00000489095 273 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 RPS4XP14-201ENST00000493072 781 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC008885.2-201ENST00000509506 930 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 TOMM22P4-201ENST00000511318 336 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC008837.2-201ENST00000513076 418 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 CYCSP22-201ENST00000517555 339 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 HIGD1AP6-201ENST00000521833 279 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 SNORD95-201ENST00000579879 68 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 DUXAP11-201ENST00000603858 526 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC084782.3-201ENST00000612282 578 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA6Q9Y5G7 AL049737.1-201ENST00000413920 1403 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms