Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 MTCO1P51-201ENST00000427672 1060 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 RPL34P6-201ENST00000432390 345 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 RPS17P8-201ENST00000434525 335 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 MTND3P4-201ENST00000453537 303 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 RN7SL558P-201ENST00000497468 299 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC106806.2-201ENST00000509365 500 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC026616.1-201ENST00000523157 525 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC069061.3-201ENST00000582254 823 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC084036.1-201ENST00000609190 508 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 MAPK10-372ENST00000641954 3413 ntBASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SHROOM4Q9ULL8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 RPS26P8-201ENST00000393490 348 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL356387.2-201ENST00000422272 243 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 MTND4LP2-201ENST00000502312 285 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 SNORA67.7-201ENST00000516664 135 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 RNU6-709P-201ENST00000517257 104 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL133338.2-201ENST00000604292 736 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL121932.1-201ENST00000605542 214 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC067838.1-201ENST00000606064 577 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC114781.5-201ENST00000615297 108 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AL118508.4-201ENST00000624142 1176 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC119674.1-220ENST00000641502 1048 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 ADAM5-202ENST00000399789 1942 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 BMPR1APS1-201ENST00000403332 1598 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 LDHAL6CP-202ENST00000550738 3224 ntBASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SHROOM4Q9ULL8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 RNU1-94P-201ENST00000362627 173 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 MIR659-201ENST00000384963 97 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AL022722.2-201ENST00000402519 180 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 RPL21P108-201ENST00000413857 481 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC234781.4-201ENST00000419384 244 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC108463.1-201ENST00000450258 347 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC098583.1-201ENST00000480875 255 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC005868.1-201ENST00000536421 331 ntBASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHROOM4Q9ULL8 CDC27P2-201ENST00000425026 1922 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 RPL21P67-201ENST00000402896 478 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 RN7SKP267-201ENST00000410381 285 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 COX5BP7-201ENST00000414780 274 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 PTP4A1P1-201ENST00000420539 515 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 NPM1P26-201ENST00000426339 738 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 NDUFA5P1-201ENST00000433858 341 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 MTND6P32-201ENST00000457611 483 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AC245028.2-201ENST00000458673 253 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 RN7SL303P-201ENST00000469773 251 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AC015922.4-201ENST00000612568 690 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AC112200.1-201ENST00000625015 234 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 AL049536.1-201ENST00000625043 744 ntBASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHROOM4Q9ULL8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHROOM4Q9ULL8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC8.95□□□□□ -0.98
SHROOM4Q9ULL8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHROOM4Q9ULL8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHROOM4Q9ULL8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
SHROOM4Q9ULL8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms