Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC000367.1-201ENST00000452711 1766 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 RNA5SP319-201ENST00000362768 119 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RN7SKP162-201ENST00000363605 345 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RNU4-68P-201ENST00000364314 141 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RNA5SP30-201ENST00000365552 115 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 MIR130A-201ENST00000385274 89 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 SSR1P2-201ENST00000415208 787 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RAC1P8-201ENST00000427086 527 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 HIGD1AP12-201ENST00000427832 281 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 RPS26P40-201ENST00000435209 294 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RPS3AP38-201ENST00000435889 763 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 EEF1A1P1-201ENST00000447052 739 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 MRPL42P4-201ENST00000453267 443 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 PTGES3P5-201ENST00000455109 434 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 RN7SL799P-201ENST00000475891 298 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 RN7SL184P-201ENST00000488308 297 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 DUTP1-201ENST00000493631 470 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 RNA5SP34-201ENST00000516887 130 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 OR7E128P-201ENST00000532736 1024 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC044913.1-201ENST00000557200 430 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 CCDC58P3-201ENST00000590792 430 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC018809.2-201ENST00000602436 3823 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 AP005137.2-201ENST00000609238 400 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AL122125.1-201ENST00000616999 600 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC234782.5-201ENST00000617723 324 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 AC015908.5-201ENST00000623289 343 ntBASIC5.2□□□□□ -1.58
LRFN1Q9P244 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRFN1Q9P244 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.2□□□□□ -1.58
LRFN1Q9P244 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC005261.4-201ENST00000600047 1385 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC093849.1-201ENST00000563631 2209 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRFN1Q9P244 GAPDHP24-201ENST00000328713 983 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 RNU4-2-201ENST00000365668 141 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 RPL31P52-201ENST00000407532 367 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC007394.1-201ENST00000421941 531 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL513175.2-201ENST00000422071 443 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 CRIP1P1-201ENST00000427567 185 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL627308.1-201ENST00000435693 821 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL390879.1-201ENST00000439143 386 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 RHEBP2-201ENST00000450289 600 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC239809.1-201ENST00000450470 217 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL450023.1-201ENST00000450868 751 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.19□□□□□ -1.58
LRFN1Q9P244 RN7SL51P-201ENST00000468230 285 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 AC100832.1-201ENST00000471945 383 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 RPL23AP44-201ENST00000482216 473 ntBASIC5.19□□□□□ -1.58
LRFN1Q9P244 RPL32P9-201ENST00000487963 407 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms