Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC073850.1-201ENST00000449243 255 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 RNU7-27P-201ENST00000459281 62 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 RNU7-140P-201ENST00000459546 60 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 BX284632.1-201ENST00000478218 541 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AP000676.2-201ENST00000529711 301 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 OR5D15P-201ENST00000531671 942 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 OSBPL9P5-201ENST00000542581 171 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 POLR2KP1-201ENST00000553226 168 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 EIF1P6-201ENST00000600054 334 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AP002799.1-201ENST00000623552 423 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC021106.3-201ENST00000623925 531 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC026422.1-201ENST00000623961 452 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 ZNF876P-202ENST00000398732 1485 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC100871.1-201ENST00000507871 1456 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 AC012321.1-201ENST00000561622 1588 ntBASIC6.13□□□□□ -1.43
VTA1Q9NP79 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.13□□□□□ -1.43
VTA1Q9NP79 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTA1Q9NP79 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC131971.1-201ENST00000332881 1482 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 SNORA17.1-201ENST00000362945 126 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 RPSAP35-201ENST00000413753 818 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 TAF13P2-201ENST00000416876 286 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AP001324.1-201ENST00000428553 399 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 YWHAEP5-201ENST00000431545 765 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 NANOGP2-201ENST00000435391 727 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 CYCSP11-201ENST00000436426 315 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 RPL7P48-201ENST00000461513 746 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC093311.1-201ENST00000506586 2021 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC026782.2-201ENST00000510845 636 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 DDX18P4-201ENST00000511690 1966 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC092593.2-201ENST00000513866 913 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 snoZ278.1-201ENST00000517059 112 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AP002812.4-201ENST00000532139 286 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC122688.1-201ENST00000541494 223 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC022662.1-201ENST00000580252 331 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AP001542.2-201ENST00000593141 364 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AL136295.6-201ENST00000610486 658 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 LINC01739-205ENST00000641890 573 ntBASIC6.12□□□□□ -1.43
VTA1Q9NP79 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTA1Q9NP79 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.12□□□□□ -1.43
VTA1Q9NP79 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
VTA1Q9NP79 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 AC144833.1-201ENST00000567953 4089 ntBASIC6.11□□□□□ -1.43
VTA1Q9NP79 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.11□□□□□ -1.43
VTA1Q9NP79 RNU6-1339P-201ENST00000363574 91 ntBASIC6.11□□□□□ -1.43
VTA1Q9NP79 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 GNG5P2-201ENST00000372054 207 ntBASIC6.11□□□□□ -1.43
VTA1Q9NP79 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTA1Q9NP79 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.11□□□□□ -1.43
VTA1Q9NP79 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.11□□□□□ -1.43
VTA1Q9NP79 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms