Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ZNF971P-201ENST00000562068 1249 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC008088.1-201ENST00000580993 280 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 MIMT1-201ENST00000597105 1050 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 NIFKP6-201ENST00000598115 845 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC110760.3-201ENST00000598794 467 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC008814.1-201ENST00000603797 406 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AL356752.1-201ENST00000615844 593 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC018926.1-201ENST00000616335 435 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC084824.4-201ENST00000620106 731 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 AC068870.3-201ENST00000625077 2536 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.33□□□□□ -1.56
EBF3Q9H4W6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EBF3Q9H4W6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SCARNA15-201ENST00000607520 4325 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC093849.1-201ENST00000563631 2209 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 TAS2R15P-201ENST00000390674 928 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 GAPDHP15-201ENST00000398586 975 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 COX5BP7-201ENST00000414780 274 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 NPM1P26-201ENST00000426339 738 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC008072.1-201ENST00000434254 824 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC073143.1-201ENST00000436316 395 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PRPF38AP2-201ENST00000438179 851 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 XKRY2-201ENST00000442362 1093 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 CEACAMP9-201ENST00000442990 513 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 GYG1P1-201ENST00000460864 698 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC093663.2-201ENST00000484625 313 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 RN7SL244P-201ENST00000493405 297 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MTND1P22-201ENST00000510572 951 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC118465.1-201ENST00000513820 1271 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 HMGN1P9-201ENST00000515212 298 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 RNU6-889P-201ENST00000517189 103 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 OR8G5-201ENST00000524943 1041 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC137768.1-201ENST00000549998 553 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MIR4330-201ENST00000579077 105 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PRPF19P1-201ENST00000584766 898 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 MTCO2P2-201ENST00000591258 225 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC068620.3-201ENST00000602749 560 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC013470.4-201ENST00000619978 986 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC095038.2-201ENST00000621464 1070 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC079298.1-201ENST00000625026 1619 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 PROS2P-201ENST00000474651 1951 ntBASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.32□□□□□ -1.56
EBF3Q9H4W6 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC007996.1-201ENST00000620414 2821 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 238.1 ms