Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC4.06□□□□□ -1.76
KRTAP3-1Q9BYR8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC104966.1-201ENST00000467010 1464 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC011008.2-201ENST00000624866 3352 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC005261.2-201ENST00000593427 4258 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AL133243.4-201ENST00000623116 3109 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC008124.1-201ENST00000609803 9730 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC008669.1-201ENST00000565823 2178 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SKP115-201ENST00000363177 317 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-188P-201ENST00000364207 107 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RNA5SP379-201ENST00000364599 113 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 Y_RNA.399-201ENST00000383955 105 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 Y_RNA.416-201ENST00000384014 113 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SNORA7.3-201ENST00000384186 139 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 Y_RNA.551-201ENST00000384661 102 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MIR637-201ENST00000385000 99 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC110754.1-201ENST00000399740 601 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC011933.1-201ENST00000413334 321 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 PUDPP1-201ENST00000421058 495 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ELOCP20-201ENST00000422460 345 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC097713.2-201ENST00000430199 356 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC105052.2-201ENST00000434317 794 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RBMY2NP-201ENST00000434454 1028 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AL772284.1-201ENST00000443421 905 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 NOTCH2P1-201ENST00000443481 624 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RPS3AP12-201ENST00000443616 753 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ELOBP1-201ENST00000447693 357 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 SETP20-201ENST00000457046 852 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL36AP13-201ENST00000457490 317 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SL573P-201ENST00000485340 276 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 GAPDHP22-201ENST00000491037 413 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC005726.1-201ENST00000494679 427 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC105758.1-201ENST00000506038 399 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MTCO3P44-201ENST00000510977 541 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC093816.1-201ENST00000515076 913 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-1092P-201ENST00000516955 87 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC091175.1-201ENST00000522168 572 ntBASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KRTAP3-1Q9BYR8 AC007342.5-201ENST00000571340 2142 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms