Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL596276.1-201ENST00000434465 418 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC006335.2-201ENST00000437993 330 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 USP9YP22-201ENST00000438971 294 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MTCO1P19-201ENST00000443487 500 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL450023.1-201ENST00000450868 751 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 OR52E3P-201ENST00000452083 936 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 RPS6P2-201ENST00000454208 705 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC008280.2-201ENST00000455473 307 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 DEFB109A-201ENST00000482450 265 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 PMS2P3-207ENST00000529061 717 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AP000916.1-201ENST00000533869 835 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MRPS21P7-201ENST00000566937 238 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC007342.5-201ENST00000571340 2142 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MIR3915-201ENST00000578518 97 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AP001267.4-201ENST00000602598 545 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC093388.1-201ENST00000609166 430 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC012409.3-201ENST00000611343 981 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC008083.4-201ENST00000615076 444 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 MIR6729-201ENST00000618194 65 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AC124312.6-202ENST00000623624 418 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 AP005435.3-201ENST00000531260 3198 ntBASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP1Q96SZ6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 CASC19-260ENST00000641828 2001 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU5B-1-201ENST00000363286 116 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU4-92P-201ENST00000363783 136 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU6-553P-201ENST00000364047 96 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RNA5SP132-201ENST00000364725 118 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 Z86062.1-201ENST00000406773 777 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 REREP1Y-201ENST00000422655 198 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 MTCO1P43-201ENST00000431831 488 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 REREP2Y-201ENST00000439103 200 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AL357520.1-201ENST00000441557 453 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC097262.1-201ENST00000452559 548 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 MTCYBP1-201ENST00000454315 1119 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC018638.3-201ENST00000461273 132 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RPL6P9-201ENST00000466502 859 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC113430.1-201ENST00000506872 718 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 DUTP7-201ENST00000507982 486 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 RPL7L1P4-201ENST00000513004 707 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 OR4V1P-201ENST00000525394 1140 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AL139174.1-201ENST00000531489 886 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 HSPE1P2-201ENST00000554777 306 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 SERPINE4P-201ENST00000554978 281 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 MIR548S-201ENST00000581352 82 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC015688.2-201ENST00000584523 262 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 DPRXP5-201ENST00000604662 539 ntBASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC111188.2-201ENST00000529697 1387 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms