Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 MTND5P1-201ENST00000445440 1375 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC010329.1-201ENST00000593903 8328 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 RPL21P65-201ENST00000406094 466 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 VN1R37P-201ENST00000419096 748 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC025164.1-201ENST00000496249 478 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC090181.2-201ENST00000602975 672 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC009120.7-201ENST00000623452 780 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AP000357.1-201ENST00000409926 1165 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC098799.1-201ENST00000504752 800 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 SMG1P6-201ENST00000532337 2930 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RPL7P4-203ENST00000430239 730 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RPL7P33-201ENST00000444159 742 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 ATP5G1P3-201ENST00000463301 410 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RPS20P21-201ENST00000466859 343 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RNA5SP360-201ENST00000516555 118 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC079880.2-201ENST00000603790 1213 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC018695.5-201ENST00000605872 315 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 MIR6500-201ENST00000622700 86 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 OR4A15-201ENST00000314706 1035 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 RNA5SP151-201ENST00000365632 117 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 MTND6P6-201ENST00000478031 263 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC087477.6-201ENST00000559595 843 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AL592436.1-201ENST00000605135 558 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AL035696.2-201ENST00000407941 709 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC004069.2-201ENST00000505438 1114 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC111000.6-201ENST00000514471 709 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC079777.1-201ENST00000623836 1953 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 TET1P1-201ENST00000426627 2301 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 CASC19-206ENST00000641028 1430 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 DOCK11P1-201ENST00000553480 5932 ntBASIC3.68□□□□□ -1.82
CSMD1Q96PZ7 AC016588.2-201ENST00000632484 3021 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AC008033.1-201ENST00000216407 1162 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AC008549.2-201ENST00000333482 706 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 RPL6P29-201ENST00000414863 865 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 SUMO2P19-201ENST00000518920 295 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 OR5B10P-201ENST00000532869 642 ntBASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.67□□□□□ -1.82
CSMD1Q96PZ7 AL159987.2-201ENST00000432754 307 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms