Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPS17P8-201ENST00000434525 335 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL138899.2-201ENST00000439139 499 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 SPRYD7P1-201ENST00000443861 570 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RPL7P33-201ENST00000444159 742 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL137845.2-201ENST00000444292 988 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 SUMO2P1-206ENST00000445436 284 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 TDGF1P1-201ENST00000445734 527 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL035551.1-201ENST00000446931 348 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 EIF4A1P11-201ENST00000451239 222 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 YRDCP3-201ENST00000456507 480 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RPS27AP2-201ENST00000457576 465 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC026348.1-201ENST00000462549 1053 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC097484.1-201ENST00000471148 389 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 OR2AO1P-201ENST00000476497 403 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RN7SL184P-201ENST00000488308 297 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RN7SL244P-201ENST00000493405 297 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 BX510359.5-201ENST00000515651 304 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 RNA5SP43-201ENST00000516559 110 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 IGHV3-32-201ENST00000519182 355 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 OR4A46P-201ENST00000527255 933 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC005363.1-201ENST00000530779 351 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC024405.1-201ENST00000532521 1042 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC018552.3-201ENST00000567416 561 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC020914.4-201ENST00000597690 277 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL357153.4-201ENST00000620487 1016 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AC136428.4-201ENST00000634254 1155 ntBASIC3.48□□□□□ -1.85
AP1S3Q96PC3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.48□□□□□ -1.85
AP1S3Q96PC3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 RNA5SP183-201ENST00000362452 119 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 RN7SKP115-201ENST00000363177 317 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 DUTP5-201ENST00000406790 469 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 RN7SKP56-201ENST00000410513 331 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 Z74021.1-201ENST00000423610 407 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 RPS20P1-201ENST00000434853 354 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 BTG3P1-201ENST00000435859 716 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AP000281.1-201ENST00000444036 316 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 EXTL2P1-201ENST00000446218 416 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 HMGN2P25-201ENST00000486956 268 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AP006289.1-201ENST00000538089 277 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL049839.1-201ENST00000556151 657 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC027455.1-201ENST00000574104 594 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL589674.2-201ENST00000604304 337 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL121932.1-201ENST00000605542 214 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC079395.2-201ENST00000610982 737 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC007204.2-201ENST00000615022 616 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 AL359757.1-201ENST00000623176 255 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms