Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AL135786.2-201ENST00000608422 615 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AP000346.3-201ENST00000622821 210 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AL132640.2-201ENST00000559968 1698 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AC107021.2-201ENST00000567714 2095 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AP000542.2-201ENST00000623199 6179 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 AC083843.3-201ENST00000623679 2186 ntBASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 OR14L1P-202ENST00000641545 3009 ntBASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ECHDC3Q96DC8 AC021146.4-201ENST00000309229 279 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RN7SKP224-201ENST00000364140 325 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AL592291.1-201ENST00000403830 352 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RPS6P2-201ENST00000454208 705 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 TPT1P1-201ENST00000458495 518 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC096741.1-201ENST00000472250 846 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 OR52A4P-201ENST00000472867 958 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC104763.1-201ENST00000475274 360 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC098799.3-201ENST00000506095 438 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 CR383656.6-201ENST00000550518 394 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC015912.2-201ENST00000571053 181 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AL133338.2-201ENST00000604292 736 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AC120338.1-201ENST00000625074 1541 ntBASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ECHDC3Q96DC8 AL136164.3-201ENST00000624429 3978 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 RNU1-83P-201ENST00000363426 164 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 RNU6-1331P-201ENST00000363658 106 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 SNORA71.2-201ENST00000364941 134 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 SNORA68.2-201ENST00000391263 128 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AL080315.1-201ENST00000406055 466 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AC069213.2-201ENST00000420238 366 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 CEACAMP9-201ENST00000442990 513 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AL162591.2-201ENST00000449634 317 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 ISCUP1-201ENST00000454451 448 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 RNA5SP228-201ENST00000516232 133 ntBASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.64□□□□□ -1.67
ECHDC3Q96DC8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms