Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 OR6K3-202ENST00000368146 996 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 SNORA40.4-201ENST00000390971 128 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AL161722.2-201ENST00000434731 981 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 ELOCP10-201ENST00000440624 327 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 PCNPP2-201ENST00000441651 455 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 RNFT1P2-201ENST00000443064 757 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 RPL7AP61-201ENST00000443410 636 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 CYCSP53-201ENST00000455540 265 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC108751.2-201ENST00000469993 231 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 RPL7P40-201ENST00000481703 745 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 CIR1P1-201ENST00000524055 1133 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 ELOCP34-201ENST00000604436 327 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC079610.2-201ENST00000604818 690 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC010200.2-201ENST00000605098 235 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 MIR7973-1-201ENST00000614683 76 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC016957.2-201ENST00000616998 848 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 CYP4F35P-202ENST00000636121 390 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.69
RFT1Q96AA3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
RFT1Q96AA3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.46□□□□□ -1.69
RFT1Q96AA3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RFT1Q96AA3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.69
RFT1Q96AA3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL451142.2-201ENST00000429076 2090 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 PHKBP1-201ENST00000450951 1951 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 RN7SKP124-201ENST00000364730 341 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 RNU1-149P-201ENST00000390870 161 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AP000580.1-201ENST00000404439 358 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 GAPDHP49-201ENST00000421421 961 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL139148.1-201ENST00000427122 680 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 YWHAZP2-201ENST00000440317 728 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 MTCYBP21-201ENST00000443300 1113 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 RPS27P5-201ENST00000444247 244 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC069540.1-201ENST00000446320 988 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC091180.1-201ENST00000462104 372 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms