Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 Z95331.1-201ENST00000623075 23112 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 MTND4P10-201ENST00000446199 1363 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ERCC4Q92889 RN7SKP15-201ENST00000364742 309 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 ERHP2-201ENST00000402323 299 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AL009179.1-201ENST00000406085 265 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 BTF3P8-201ENST00000414577 526 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC01347-201ENST00000417964 355 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 USP9YP26-201ENST00000421008 661 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC4Q92889 GTF2IP2-201ENST00000424290 697 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC234781.3-201ENST00000452540 973 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC144530.1-201ENST00000452862 555 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.22□□□□□ -1.41
ERCC4Q92889 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC091912.1-201ENST00000511351 248 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 DUX4L52-201ENST00000549363 777 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.22□□□□□ -1.41
ERCC4Q92889 DPRXP4-201ENST00000578053 568 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 MIR4660-201ENST00000583549 74 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC018618.2-201ENST00000604770 446 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC013468.1-201ENST00000608680 598 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 VIS1.1-201ENST00000610517 203 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC024257.5-201ENST00000612739 531 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC025574.2-201ENST00000615621 514 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 FRG1HP-204ENST00000617940 757 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC01808-202ENST00000641680 1116 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 AC100757.1-201ENST00000616872 1835 ntBASIC6.22□□□□□ -1.41
ERCC4Q92889 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ERCC4Q92889 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ERCC4Q92889 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC4Q92889 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC4Q92889 MTND4P5-201ENST00000435821 1374 ntBASIC6.21□□□□□ -1.41
ERCC4Q92889 DDX43P2-201ENST00000604753 1354 ntBASIC6.21□□□□□ -1.41
ERCC4Q92889 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.21□□□□□ -1.41
ERCC4Q92889 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
ERCC4Q92889 AL360270.2-201ENST00000562952 5985 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 SUGT1P2-201ENST00000379452 992 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 SNORD116-4-201ENST00000384733 96 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AL034403.1-201ENST00000399414 885 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 RNF10P1-201ENST00000418589 369 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AC007161.1-204ENST00000423039 460 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 HIGD1AP12-201ENST00000427832 281 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 PA2G4P6-201ENST00000438325 1197 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 ARL4AP3-201ENST00000441452 574 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 ATP5LP5-201ENST00000483050 299 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AC091544.1-201ENST00000484702 348 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 IGBP1P4-201ENST00000503202 879 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AC092709.1-201ENST00000521355 1045 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.21□□□□□ -1.42
ERCC4Q92889 OR11H3P-201ENST00000554547 982 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 SETP1-201ENST00000556014 845 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 AP001269.3-201ENST00000588718 329 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AL096712.1-201ENST00000614561 159 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AC073569.3-201ENST00000619055 682 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AL158062.1-201ENST00000619632 745 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 AC135068.5-201ENST00000624197 983 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms