Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MYL12BP2-201ENST00000503948 512 ntBASIC7.36□□□□□ -1.23
TOPBP1Q92547 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.36□□□□□ -1.23
TOPBP1Q92547 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.36□□□□□ -1.23
TOPBP1Q92547 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOPBP1Q92547 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOPBP1Q92547 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 TPT1P2-201ENST00000413105 503 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 AC115285.1-201ENST00000424879 736 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 AC022336.1-201ENST00000475510 337 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 SCARNA13-201ENST00000516672 275 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 SNORA51-201ENST00000606420 132 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 AC099669.2-201ENST00000616549 437 ntBASIC7.35□□□□□ -1.23
TOPBP1Q92547 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOPBP1Q92547 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.35□□□□□ -1.23
TOPBP1Q92547 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
TOPBP1Q92547 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.34□□□□□ -1.23
TOPBP1Q92547 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TOPBP1Q92547 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC7.34□□□□□ -1.23
TOPBP1Q92547 UBE2V1P3-201ENST00000439651 417 ntBASIC7.34□□□□□ -1.23
TOPBP1Q92547 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.34□□□□□ -1.23
TOPBP1Q92547 AC010374.1-201ENST00000503762 1237 ntBASIC7.34□□□□□ -1.23
TOPBP1Q92547 RN7SL435P-201ENST00000584418 282 ntBASIC7.34□□□□□ -1.23
TOPBP1Q92547 AC025175.1-201ENST00000606482 759 ntBASIC7.34□□□□□ -1.23
TOPBP1Q92547 AC010608.2-201ENST00000624830 470 ntBASIC7.34□□□□□ -1.23
TOPBP1Q92547 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.34□□□□□ -1.23
TOPBP1Q92547 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TOPBP1Q92547 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
TOPBP1Q92547 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 RNU11-4P-201ENST00000391149 133 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AP000357.1-201ENST00000409926 1165 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 MTCO1P54-201ENST00000430139 712 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 BTF3P6-201ENST00000448054 499 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 AP000889.1-201ENST00000530968 660 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC087477.6-201ENST00000559595 843 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 ADAD1P2-201ENST00000588476 646 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC112230.1-201ENST00000604342 547 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC007179.3-201ENST00000604976 235 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 AC015908.5-201ENST00000623289 343 ntBASIC7.33□□□□□ -1.24
TOPBP1Q92547 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOPBP1Q92547 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOPBP1Q92547 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOPBP1Q92547 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOPBP1Q92547 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.33□□□□□ -1.24
TOPBP1Q92547 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 TCEA1P4-201ENST00000415066 844 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 AL050321.1-201ENST00000432363 400 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 CYCSP43-201ENST00000438233 310 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AL049874.2-201ENST00000492636 288 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TOPBP1Q92547 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 Z74021.1-201ENST00000423610 407 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 SNORA74D-201ENST00000516404 141 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.32□□□□□ -1.24
TOPBP1Q92547 AC090912.3-201ENST00000609775 533 ntBASIC7.32□□□□□ -1.24
TOPBP1Q92547 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TOPBP1Q92547 SNORA74C-2-201ENST00000411179 201 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TOPBP1Q92547 AL512326.1-201ENST00000443050 721 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 NOTCH2P1-201ENST00000443481 624 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 RN7SKP157-201ENST00000516174 282 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 RNA5SP73-201ENST00000516744 108 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 AL121834.1-201ENST00000572284 509 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 MIR5685-201ENST00000579080 79 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 AC008013.2-202ENST00000637965 364 ntBASIC7.31□□□□□ -1.24
TOPBP1Q92547 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.31□□□□□ -1.24
TOPBP1Q92547 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms