Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.48□□□□□ -1.53
SIMC1Q8NDZ2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SIMC1Q8NDZ2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SIMC1Q8NDZ2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.48□□□□□ -1.53
SIMC1Q8NDZ2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.48□□□□□ -1.53
SIMC1Q8NDZ2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 MFSD8-239ENST00000641590 2479 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RNA5SP27-201ENST00000363839 119 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RN7SKP128-201ENST00000364270 303 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RNU1-74P-201ENST00000384108 171 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RPL23AP59-201ENST00000399415 461 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AL355379.1-201ENST00000405542 640 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 Y_RNA.604-201ENST00000410574 102 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RN7SKP29-201ENST00000410957 272 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC013404.1-201ENST00000413068 249 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 HMGB3P31-201ENST00000413333 595 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC079809.1-201ENST00000415468 276 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RPS3AP37-201ENST00000419176 745 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 GTF2IP3-201ENST00000433887 494 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 MTCYBP39-201ENST00000437562 491 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC073109.1-201ENST00000445066 978 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC026348.1-201ENST00000462549 1053 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RPL6P9-201ENST00000466502 859 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RNA5SP230-201ENST00000517039 122 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 PCNAP4-201ENST00000532690 730 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC011611.5-201ENST00000552477 578 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC068714.1-201ENST00000559623 800 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC024060.1-201ENST00000607052 494 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 TUSC7.1-201ENST00000610969 165 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 MIR6826-201ENST00000617808 98 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC067852.7-201ENST00000623270 535 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AL137100.1-201ENST00000556703 1620 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 AC093849.1-201ENST00000563631 2209 ntBASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIMC1Q8NDZ2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 AC027088.4-201ENST00000611559 1947 ntBASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SIMC1Q8NDZ2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 YES1P1-201ENST00000418510 1628 ntBASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 AP004607.3-201ENST00000530354 3915 ntBASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 AL035419.1-201ENST00000397037 564 ntBASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.46□□□□□ -1.54
SIMC1Q8NDZ2 RAP1BP1-201ENST00000412709 553 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms