Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 VN1R54P-201ENST00000435210 1049 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 RPL12P18-201ENST00000437175 325 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 CACYBPP1-201ENST00000438592 684 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 ARF4P4-201ENST00000439608 520 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC004854.1-201ENST00000440356 349 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC097499.1-201ENST00000444277 208 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 HMGB1P38-201ENST00000490557 577 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC069304.1-201ENST00000491593 704 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 ENPP7P11-201ENST00000505915 627 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 HMGN1P9-201ENST00000515212 298 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 SEPT10P1-201ENST00000517342 1162 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC118942.1-201ENST00000529674 1035 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 OR1F2P-201ENST00000570470 933 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 MIR4436B2-201ENST00000581415 91 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 MIR4436B1-201ENST00000583272 91 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 MIR7853-201ENST00000584820 132 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC108738.1-201ENST00000603703 237 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC011374.2-201ENST00000607135 526 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC021106.3-201ENST00000623925 531 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC135068.12-201ENST00000637370 931 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC020633.1-201ENST00000468439 2247 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BEST3Q8N1M1 AC011755.1-201ENST00000623763 2049 ntBASIC4.82□□□□□ -1.64
BEST3Q8N1M1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 SNURFL-201ENST00000309296 343 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL133270.1-201ENST00000402635 279 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RPS27AP11-201ENST00000402798 447 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 MTCO3P4-201ENST00000419236 787 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC023128.2-201ENST00000420880 1223 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RPS4XP16-201ENST00000427198 791 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC093422.3-201ENST00000428506 305 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 ETF1P3-201ENST00000430422 1160 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RPS29P10-201ENST00000439197 166 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 RPL35AP28-201ENST00000459730 331 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC037198.2-201ENST00000478845 733 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AL049874.2-201ENST00000492636 288 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 FTH1P11-201ENST00000517577 551 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 OR7E13P-201ENST00000526052 910 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 SS18L2P2-201ENST00000583960 235 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC012254.4-201ENST00000588843 273 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC069431.2-201ENST00000604149 1099 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC018754.1-201ENST00000607486 925 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC084824.4-201ENST00000620106 731 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC145207.9-201ENST00000623802 325 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms