Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 STRADBP1-201ENST00000478954 1281 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC093890.1-201ENST00000502554 540 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC137768.1-201ENST00000549998 553 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC063949.1-201ENST00000552900 865 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC087283.1-201ENST00000604029 1074 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 MIR6780A-201ENST00000615089 68 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC009032.1-201ENST00000617574 431 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 MIR7703-201ENST00000620784 77 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL445487.1-201ENST00000415694 1580 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC083843.2-201ENST00000568248 6253 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 ST13P16-201ENST00000401760 781 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AP000580.1-201ENST00000404439 358 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RNU2-50P-201ENST00000410494 143 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RN7SKP106-201ENST00000410832 272 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL590139.1-201ENST00000416267 400 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 OR2AH1P-201ENST00000425717 928 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL445528.1-201ENST00000426330 420 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 BTBD7P2-201ENST00000441962 620 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 H2AFZP5-201ENST00000446960 382 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 BUD31P2-201ENST00000449374 300 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TPRKBP1-201ENST00000456243 481 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC090142.1-201ENST00000465776 462 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC007686.1-201ENST00000488511 463 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC020890.1-201ENST00000491837 504 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RPL36AP41-201ENST00000493820 306 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC025164.1-201ENST00000496249 478 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RN7SKP46-201ENST00000515942 234 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RNA5SP303-201ENST00000516192 130 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 OR4V1P-201ENST00000525394 1140 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AP006289.1-201ENST00000538089 277 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RN7SL690P-201ENST00000582087 240 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL021368.1-201ENST00000607490 540 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL354696.1-201ENST00000614652 497 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL158062.1-201ENST00000619632 745 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC011815.3-201ENST00000624194 473 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 AL359922.3-201ENST00000624779 1670 ntBASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C9orf40Q8IXQ3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC010132.2-201ENST00000295493 1043 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms