Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 DDX18P3-201ENST00000404856 2007 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 RN7SKP206-201ENST00000410823 293 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 DPPA2P3-201ENST00000411853 655 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 VN2R3P-201ENST00000422626 1412 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 PPIAP20-201ENST00000449839 135 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 FCF1P7-201ENST00000451185 558 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AL606490.1-201ENST00000452266 765 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC079168.2-201ENST00000453977 416 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC090114.3-201ENST00000479267 829 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 UBA52P7-201ENST00000486088 380 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC140172.1-201ENST00000502928 141 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC091868.1-201ENST00000508746 304 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 IGKV2-18-201ENST00000522607 343 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 OR7A19P-201ENST00000608051 733 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 FAM27B-201ENST00000610601 213 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC004241.3-201ENST00000611728 517 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC009704.2-201ENST00000618739 483 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 MIR7154-201ENST00000620673 73 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC015908.5-201ENST00000623289 343 ntBASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.59□□□□□ -1.67
NUDCD3Q8IVD9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NUDCD3Q8IVD9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RPS24P12-201ENST00000402084 394 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 MIR1286-201ENST00000408112 78 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RN7SKP216-201ENST00000411050 312 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 EIF4EP1-201ENST00000422311 642 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RPS27AP15-201ENST00000447672 466 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RN7SL172P-201ENST00000460535 303 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC105918.1-201ENST00000474399 838 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC090013.1-201ENST00000485147 480 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 DYNLL1P4-201ENST00000549314 266 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 MTND6P33-201ENST00000571794 183 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AL121834.1-201ENST00000572284 509 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 RPL26P30-202ENST00000602923 645 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC091905.2-201ENST00000623143 306 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 AC007382.1-201ENST00000624376 2618 ntBASIC4.58□□□□□ -1.68
NUDCD3Q8IVD9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 RNA5SP151-201ENST00000365632 117 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms