Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 BMS1P7-201ENST00000602440 1052 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC091193.1-201ENST00000604640 448 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC010200.2-201ENST00000605098 235 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL355802.3-201ENST00000607571 545 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AP001521.2-201ENST00000608772 546 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC015922.4-201ENST00000612568 690 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 MRPL57P1-201ENST00000621486 265 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AP003400.3-201ENST00000624904 346 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC010168.2-201ENST00000562691 5428 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL161901.1-201ENST00000624954 3425 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC011455.2-201ENST00000599320 3336 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RNU6-845P-201ENST00000362578 103 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RNU5E-5P-201ENST00000365379 116 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RNA5SP88-201ENST00000365560 109 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RNU6-767P-201ENST00000384132 107 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AP000357.1-201ENST00000409926 1165 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC017035.1-201ENST00000411999 1115 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 BTF3P9-201ENST00000418784 283 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL389915.1-201ENST00000422463 466 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 NUP35P1-201ENST00000422734 947 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL050321.1-201ENST00000432363 400 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RPSAP32-201ENST00000432681 526 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 BX679664.2-201ENST00000439282 283 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC002542.1-201ENST00000440683 193 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 BRK1P2-201ENST00000442875 223 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SNRPGP6-201ENST00000451124 220 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC099670.1-201ENST00000455141 783 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RPSAP39-201ENST00000467439 883 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RN7SL741P-201ENST00000482473 289 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC090013.1-201ENST00000485147 480 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RPL39P36-201ENST00000490784 156 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 RPL19P11-201ENST00000495944 589 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC008629.2-201ENST00000503783 483 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC131392.1-201ENST00000506490 633 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 snoU109.5-201ENST00000516231 132 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SNORA18.6-201ENST00000516792 115 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 OR6C73P-201ENST00000546432 358 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC137768.1-201ENST00000549998 553 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC026956.1-201ENST00000558741 396 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 MIR212-201ENST00000586026 110 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC006116.10-201ENST00000591836 581 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 NRBF2P5-201ENST00000603087 788 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC124303.1-201ENST00000605703 360 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC103710.1-201ENST00000610003 901 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AL442067.1-201ENST00000613261 223 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 MIR6503-201ENST00000622884 86 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 AC079228.1-201ENST00000624774 1049 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4DQ86TL0 DOCK11P1-201ENST00000553480 5932 ntBASIC5.92□□□□□ -1.46
ATG4DQ86TL0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
ATG4DQ86TL0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms