Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AP000473.2-201ENST00000602659 1537 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RNU6-216P-201ENST00000363282 104 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 SNORA32.2-201ENST00000384049 122 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 Y_RNA.445-201ENST00000384168 102 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AL034403.1-201ENST00000399414 885 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 ELOCP4-201ENST00000420090 333 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 HMGB1P18-201ENST00000438801 619 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RBMY2EP-202ENST00000456360 940 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RPS16P9-201ENST00000477220 427 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RPL7P39-201ENST00000481157 744 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RPS3AP50-201ENST00000487064 803 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC006390.1-201ENST00000508068 283 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 PTP4A1P4-201ENST00000512479 322 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC011352.2-201ENST00000514574 1016 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RNA5SP135-201ENST00000517019 125 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC130366.1-201ENST00000526505 1192 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 NANOGNBP2-201ENST00000544753 553 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC068305.2-201ENST00000550567 1205 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 SCOCP1-201ENST00000554676 349 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 MIR4428-201ENST00000584884 73 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC090236.2-201ENST00000587933 1101 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC011447.2-201ENST00000592921 283 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC011497.2-201ENST00000600255 639 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC139493.1-201ENST00000604368 397 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC009027.1-201ENST00000604510 479 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC103710.3-201ENST00000608157 948 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AL451049.1-201ENST00000608672 497 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AL161734.1-201ENST00000609720 557 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AP005212.3-201ENST00000619964 528 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 AC063952.1-203ENST00000634410 658 ntBASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
LYSMD3Q7Z3D4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC129502.1-201ENST00000623261 1654 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 SNORA69-201ENST00000383895 132 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 MIR199B-201ENST00000384849 110 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 MRPL50P2-201ENST00000416821 482 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC009161.1-201ENST00000417306 376 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC007365.2-201ENST00000428806 458 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 IFNA20P-201ENST00000436840 528 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 RPL7P29-201ENST00000437151 728 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC009518.3-201ENST00000438972 253 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 CBX1P1-201ENST00000440184 427 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC104837.1-201ENST00000444644 1587 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 POU5F1P7-201ENST00000508759 541 ntBASIC6.97□□□□□ -1.29
LYSMD3Q7Z3D4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms