Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 KCTD9P6-201ENST00000522306 950 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 OR5AN2P-201ENST00000534535 896 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC068790.7-201ENST00000602347 528 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC005229.3-201ENST00000603438 323 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 BNIP3P7-201ENST00000605641 516 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC016911.1-201ENST00000613297 452 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 AC007382.1-201ENST00000624376 2618 ntBASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
RFWD3Q6PCD5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 MFSD8-216ENST00000641147 4009 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 BMS1P3-201ENST00000372011 932 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AP000580.1-201ENST00000404439 358 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 Y_RNA.625-201ENST00000411256 107 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 ATG4AP1-201ENST00000416893 538 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC013470.3-201ENST00000420252 1194 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 THAP12P8-201ENST00000447914 2115 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL513533.1-201ENST00000453728 415 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AP000942.1-201ENST00000463969 747 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 RN7SL459P-201ENST00000481078 302 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC021146.3-201ENST00000511911 260 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 FKBP1BP1-201ENST00000553366 325 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL110118.1-201ENST00000553543 400 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC087477.6-201ENST00000559595 843 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC084759.1-201ENST00000561168 290 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AC073091.2-201ENST00000603205 907 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL118556.2-201ENST00000614375 824 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AP000346.3-201ENST00000622821 210 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 Z95327.2-201ENST00000414579 1873 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 DDX18P4-201ENST00000511690 1966 ntBASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFWD3Q6PCD5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AC008549.2-201ENST00000333482 706 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 NDUFA12P1-201ENST00000455914 406 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 TRBV8-1-201ENST00000481590 279 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 RNU6-943P-201ENST00000516960 98 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 IGKV1-32-201ENST00000519290 311 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 AC010547.7-201ENST00000570323 333 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 RN7SL652P-201ENST00000577769 300 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 RN7SL176P-201ENST00000580352 264 ntBASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.88□□□□□ -1.63
RFWD3Q6PCD5 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms