Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NPM1P47-201ENST00000560843 856 ntBASIC4.46□□□□□ -1.7
NIPAL3Q6P499 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 OR7E18P-201ENST00000592589 702 ntBASIC4.46□□□□□ -1.7
NIPAL3Q6P499 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NIPAL3Q6P499 DDX18P5-201ENST00000534547 1306 ntBASIC4.46□□□□□ -1.7
NIPAL3Q6P499 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC005332.5-201ENST00000591222 2919 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 HSPA8P18-201ENST00000439846 1928 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 RN7SKP224-201ENST00000364140 325 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 Z97832.1-201ENST00000402490 328 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL592291.1-201ENST00000403830 352 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL512430.2-201ENST00000406786 339 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 SPTLC1P2-201ENST00000407089 121 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 DPPA2P3-201ENST00000411853 655 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 Z68694.1-201ENST00000413929 841 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 GJA6P-201ENST00000415117 1042 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL353597.2-202ENST00000434901 373 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 NMNAT1P2-201ENST00000435192 860 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 MTND2P21-201ENST00000436242 1042 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC092013.1-201ENST00000438795 332 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL450263.2-201ENST00000439400 589 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 OR7E125P-201ENST00000443450 846 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 CEACAMP7-201ENST00000444105 496 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL137845.2-201ENST00000444292 988 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 RNU6-1218P-201ENST00000458990 108 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 HMGB1P46-201ENST00000520062 610 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 MIR4691-201ENST00000583764 85 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 RNF138P2-201ENST00000603490 592 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC012557.1-201ENST00000607115 611 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL627230.1-201ENST00000613077 211 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC116447.1-201ENST00000613153 453 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL591926.8-201ENST00000616876 211 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC016769.4-201ENST00000616893 535 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 uc_338.9-201ENST00000617424 182 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC019206.1-201ENST00000621938 425 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AP002799.1-201ENST00000623552 423 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 DDX6P1-205ENST00000441966 1436 ntBASIC4.45□□□□□ -1.7
NIPAL3Q6P499 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.45□□□□□ -1.7
NIPAL3Q6P499 AL034370.1-201ENST00000397254 1590 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNU4-39P-201ENST00000362455 127 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNA5SP305-201ENST00000362665 119 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNU4-4P-201ENST00000364588 130 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 CHMP1B2P-201ENST00000399581 597 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RN7SKP278-201ENST00000410504 342 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RN7SKP97-201ENST00000410966 333 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RNU6-603P-201ENST00000411403 107 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.44□□□□□ -1.7
NIPAL3Q6P499 RPL23AP27-201ENST00000415161 451 ntBASIC4.44□□□□□ -1.7
NIPAL3Q6P499 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms