Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 RNU1-46P-201ENST00000384425 164 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 Y_RNA.548-201ENST00000384656 105 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AL354751.2-201ENST00000415471 210 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC027644.1-201ENST00000419595 298 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 ETF1P3-201ENST00000430422 1160 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC104850.1-201ENST00000435940 476 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 BMS1P10-201ENST00000443754 1120 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 COX4I1P2-201ENST00000447446 547 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 PSPHP1-201ENST00000450062 261 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC128716.1-201ENST00000475129 166 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC114786.4-201ENST00000508771 728 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC079395.1-201ENST00000510981 262 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 COX6B1P4-201ENST00000519826 484 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 NPIPB14P-203ENST00000532298 987 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC008055.1-201ENST00000547032 609 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 MIR3912-201ENST00000577566 105 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF43Q68DV7 RN7SL475P-201ENST00000583379 298 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC008521.2-201ENST00000591021 259 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 BNIP3P11-201ENST00000603878 563 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC073046.2-201ENST00000604756 527 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC019193.2-201ENST00000610012 634 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC079684.1-201ENST00000621405 437 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 AC090574.1-201ENST00000623186 233 ntBASIC6.65□□□□□ -1.34
RNF43Q68DV7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF43Q68DV7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF43Q68DV7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.65□□□□□ -1.35
RNF43Q68DV7 AC010624.4-201ENST00000597606 1351 ntBASIC6.65□□□□□ -1.35
RNF43Q68DV7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF43Q68DV7 AC092111.2-201ENST00000611627 1414 ntBASIC6.65□□□□□ -1.35
RNF43Q68DV7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RNF43Q68DV7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 MTCO1P11-201ENST00000429111 1528 ntBASIC6.65□□□□□ -1.35
RNF43Q68DV7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 AC079298.1-201ENST00000625026 1619 ntBASIC6.65□□□□□ -1.35
RNF43Q68DV7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF43Q68DV7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC010168.2-201ENST00000562691 5428 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 RNY4P14-201ENST00000363656 96 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 RNU1-59P-201ENST00000364829 162 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 RPS3AP23-201ENST00000401762 784 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL391422.1-201ENST00000402155 436 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL356968.2-201ENST00000412769 1257 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 RPS17P17-201ENST00000419392 409 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC003989.1-201ENST00000434569 565 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 MGAT2P1-201ENST00000449718 797 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 RN7SL101P-201ENST00000496350 279 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 HMGN1P13-201ENST00000505795 138 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 PTGES3P3-201ENST00000511479 482 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 LRRC34P2-201ENST00000514850 553 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 CYCSP25-201ENST00000525280 316 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC022690.1-201ENST00000526681 550 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms