Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RNU6-1214P-201ENST00000363650 109 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RNU6-560P-201ENST00000364007 108 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 Y_RNA.465-201ENST00000384293 102 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RNY3P9-201ENST00000384727 106 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RNA5SP91-201ENST00000390902 119 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RPL21P43-201ENST00000425440 472 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RPS6P15-201ENST00000431996 751 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PCBP2P1-201ENST00000437262 977 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 COX7BP2-201ENST00000437976 242 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PPIAP17-201ENST00000438507 471 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 USP9YP22-201ENST00000438971 294 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC004865.1-201ENST00000442276 1003 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC002553.2-201ENST00000453217 340 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC044810.1-201ENST00000480271 711 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC006539.1-201ENST00000481419 501 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RN7SL809P-201ENST00000482040 297 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC005351.1-201ENST00000511152 786 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC093755.1-201ENST00000512950 1023 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC119751.5-201ENST00000514077 770 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 OR1E3-201ENST00000575608 948 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AP005119.1-201ENST00000580956 292 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC091488.1-201ENST00000604239 660 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC145423.1-201ENST00000605712 336 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC097478.2-201ENST00000610572 514 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AL139099.4-201ENST00000614802 114 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC129915.3-201ENST00000634128 948 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 QRSL1P1-201ENST00000400977 1540 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC006206.1-201ENST00000544842 3387 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 RN7SKP78-201ENST00000364711 318 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 RNA5SP279-201ENST00000365513 117 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 ATP5F1P2-201ENST00000398143 760 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 NCSTNP1-201ENST00000406229 144 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 GTF2IP23-201ENST00000423746 351 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 RPS27AP15-201ENST00000447672 466 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC005077.1-201ENST00000449226 375 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC004129.2-201ENST00000457229 287 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 RNU1-88P-201ENST00000459274 128 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC018797.1-201ENST00000510791 255 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms