Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 BTG3P1-201ENST00000435859 716 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 PRPF38AP2-201ENST00000438179 851 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 SLC25A18P1-201ENST00000449385 454 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC239809.1-201ENST00000450470 217 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RPL23AP56-201ENST00000460778 453 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RNA5SP446-201ENST00000515955 82 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RNU1-6P-201ENST00000516290 144 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AP006289.1-201ENST00000538089 277 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 NDUFA5P11-201ENST00000567995 343 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC020978.7-201ENST00000575953 1187 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC007497.1-201ENST00000610421 561 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 uc_338.32-201ENST00000615087 172 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL158062.1-201ENST00000619632 745 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL355852.1-201ENST00000454081 1771 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC027287.1-201ENST00000553115 1453 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.15□□□□□ -1.74
CCDC58Q4VC31 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 AC099654.2-201ENST00000433031 1980 ntBASIC4.15□□□□□ -1.74
CCDC58Q4VC31 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC58Q4VC31 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 ZNF603P-201ENST00000405613 487 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 U3.36-201ENST00000408418 213 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC093698.1-201ENST00000423843 571 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 RPL21P43-201ENST00000425440 472 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 SEC63P1-201ENST00000425785 1258 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 RPL21P91-201ENST00000429231 479 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 PPIAP17-201ENST00000438507 471 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC243772.1-201ENST00000451620 410 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC092045.1-201ENST00000495716 1231 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 MTATP6P1-201ENST00000514057 681 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 HNRNPCP4-201ENST00000571636 900 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 RN7SL802P-201ENST00000577858 299 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 MIR5699-201ENST00000578903 90 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 MIR4644-201ENST00000579929 84 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AL512329.2-201ENST00000607350 548 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC004477.3-201ENST00000614061 590 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AP002505.2-201ENST00000623585 696 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 AL049555.1-201ENST00000562834 1933 ntBASIC4.15□□□□□ -1.75
CCDC58Q4VC31 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC58Q4VC31 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 RN7SKP115-201ENST00000363177 317 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 SNORA17A-201ENST00000391185 133 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AP002530.1-201ENST00000405705 684 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 RNA5SP239-201ENST00000410218 129 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AL513325.1-201ENST00000417716 1034 ntBASIC4.14□□□□□ -1.75
CCDC58Q4VC31 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC58Q4VC31 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms