Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RN7SL356P-201ENST00000582228 248 ntBASIC4.85□□□□□ -1.63
LTBQ06643 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.85□□□□□ -1.63
LTBQ06643 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.85□□□□□ -1.63
LTBQ06643 uc_338.18-201ENST00000615451 175 ntBASIC4.85□□□□□ -1.63
LTBQ06643 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.85□□□□□ -1.63
LTBQ06643 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LTBQ06643 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.85□□□□□ -1.63
LTBQ06643 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
LTBQ06643 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LTBQ06643 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.85□□□□□ -1.63
LTBQ06643 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LTBQ06643 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.84□□□□□ -1.63
LTBQ06643 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.84□□□□□ -1.63
LTBQ06643 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LTBQ06643 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 OR10AB1P-202ENST00000641219 1686 ntBASIC4.84□□□□□ -1.63
LTBQ06643 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 MIR133B-201ENST00000362210 119 ntBASIC4.84□□□□□ -1.63
LTBQ06643 RNU4-28P-201ENST00000364739 141 ntBASIC4.84□□□□□ -1.63
LTBQ06643 RNU6-796P-201ENST00000391086 107 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LTBQ06643 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 LIPT1P1-201ENST00000415870 1186 ntBASIC4.84□□□□□ -1.63
LTBQ06643 RPL22P18-201ENST00000417197 377 ntBASIC4.84□□□□□ -1.63
LTBQ06643 VN1R31P-201ENST00000417498 730 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC010099.3-201ENST00000423896 409 ntBASIC4.84□□□□□ -1.63
LTBQ06643 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.84□□□□□ -1.63
LTBQ06643 PRUNEP1-201ENST00000425846 705 ntBASIC4.84□□□□□ -1.63
LTBQ06643 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.84□□□□□ -1.63
LTBQ06643 AC007563.3-201ENST00000433233 371 ntBASIC4.84□□□□□ -1.63
LTBQ06643 USP9YP24-201ENST00000434374 697 ntBASIC4.84□□□□□ -1.63
LTBQ06643 MTCYBP29-201ENST00000436327 1006 ntBASIC4.84□□□□□ -1.63
LTBQ06643 PSMD10P3-201ENST00000437000 448 ntBASIC4.84□□□□□ -1.63
LTBQ06643 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.84□□□□□ -1.63
LTBQ06643 VN1R25P-201ENST00000443385 738 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC016772.1-201ENST00000444170 1261 ntBASIC4.84□□□□□ -1.63
LTBQ06643 USP9YP17-201ENST00000444617 696 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 AL161722.1-201ENST00000446972 1032 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AL672138.1-201ENST00000450604 1015 ntBASIC4.84□□□□□ -1.63
LTBQ06643 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 AL445669.2-201ENST00000454425 421 ntBASIC4.84□□□□□ -1.63
LTBQ06643 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 RPS18P6-201ENST00000476880 458 ntBASIC4.84□□□□□ -1.63
LTBQ06643 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 IMPA1P1-201ENST00000510718 842 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 AC079075.1-201ENST00000559543 878 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 AC124283.4-201ENST00000581815 456 ntBASIC4.84□□□□□ -1.63
LTBQ06643 MIR4480-201ENST00000582492 71 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.84□□□□□ -1.63
LTBQ06643 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 AC091057.2-201ENST00000602594 792 ntBASIC4.84□□□□□ -1.63
LTBQ06643 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.84□□□□□ -1.63
LTBQ06643 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.84□□□□□ -1.63
LTBQ06643 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 AC093673.2-201ENST00000609674 331 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC009704.2-201ENST00000618739 483 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AL035461.2-201ENST00000619201 524 ntBASIC4.84□□□□□ -1.63
LTBQ06643 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 AC091304.6-201ENST00000619761 202 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AC138965.3-201ENST00000623875 498 ntBASIC4.84□□□□□ -1.63
LTBQ06643 AL512506.2-201ENST00000624472 458 ntBASIC4.84□□□□□ -1.63
LTBQ06643 SAMMSON-209ENST00000641222 1100 ntBASIC4.84□□□□□ -1.63
LTBQ06643 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LTBQ06643 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LTBQ06643 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LTBQ06643 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LTBQ06643 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LTBQ06643 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LTBQ06643 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms