Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
TPM4P67936 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM4P67936 PABPC1P6-201ENST00000445594 1829 ntBASIC5.07□□□□□ -1.6
TPM4P67936 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 RNU1-15P-201ENST00000353977 144 ntBASIC5.07□□□□□ -1.6
TPM4P67936 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM4P67936 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM4P67936 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM4P67936 RPS12P5-201ENST00000423449 371 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM4P67936 MAPRE1P3-201ENST00000435438 796 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AC092647.3-201ENST00000443044 633 ntBASIC5.07□□□□□ -1.6
TPM4P67936 RPL7P33-201ENST00000444159 742 ntBASIC5.07□□□□□ -1.6
TPM4P67936 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 AC093270.2-201ENST00000486157 792 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AC109462.1-201ENST00000491087 368 ntBASIC5.07□□□□□ -1.6
TPM4P67936 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.07□□□□□ -1.6
TPM4P67936 PPM1AP1-201ENST00000502740 1135 ntBASIC5.07□□□□□ -1.6
TPM4P67936 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.07□□□□□ -1.6
TPM4P67936 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TPM4P67936 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM4P67936 RN7SL652P-201ENST00000577769 300 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AC006116.3-201ENST00000592968 361 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AC011453.2-201ENST00000603737 729 ntBASIC5.07□□□□□ -1.6
TPM4P67936 AP002360.3-201ENST00000607673 710 ntBASIC5.07□□□□□ -1.6
TPM4P67936 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM4P67936 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 SAMMSON-226ENST00000642089 1582 ntBASIC5.07□□□□□ -1.6
TPM4P67936 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM4P67936 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 RPL23P2-201ENST00000320371 421 ntBASIC5.06□□□□□ -1.6
TPM4P67936 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 RNA5SP151-201ENST00000365632 117 ntBASIC5.06□□□□□ -1.6
TPM4P67936 U3.25-201ENST00000391209 220 ntBASIC5.06□□□□□ -1.6
TPM4P67936 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.06□□□□□ -1.6
TPM4P67936 OR51B3P-201ENST00000412287 913 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 CHEK2P3-201ENST00000416118 248 ntBASIC5.06□□□□□ -1.6
TPM4P67936 GEMIN8P3-201ENST00000445417 720 ntBASIC5.06□□□□□ -1.6
TPM4P67936 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 AC104763.1-201ENST00000475274 360 ntBASIC5.06□□□□□ -1.6
TPM4P67936 UBA52P7-201ENST00000486088 380 ntBASIC5.06□□□□□ -1.6
TPM4P67936 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 VWA8P1-201ENST00000510889 176 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AC013701.1-201ENST00000522657 465 ntBASIC5.06□□□□□ -1.6
TPM4P67936 MORF4L1P3-201ENST00000525966 950 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM4P67936 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM4P67936 BNIP3P32-201ENST00000600015 554 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM4P67936 AC020634.1-201ENST00000608701 549 ntBASIC5.06□□□□□ -1.6
TPM4P67936 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.06□□□□□ -1.6
TPM4P67936 AC074276.2-201ENST00000619891 348 ntBASIC5.06□□□□□ -1.6
TPM4P67936 RMST_9.1-201ENST00000619945 193 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AC004808.2-201ENST00000627965 773 ntBASIC5.06□□□□□ -1.6
TPM4P67936 LINC01739-205ENST00000641890 573 ntBASIC5.06□□□□□ -1.6
TPM4P67936 AC108467.2-201ENST00000617640 1597 ntBASIC5.06□□□□□ -1.6
TPM4P67936 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM4P67936 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 AC107021.2-201ENST00000567714 2095 ntBASIC5.06□□□□□ -1.6
TPM4P67936 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
TPM4P67936 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM4P67936 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM4P67936 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM4P67936 AC139769.1-204ENST00000472297 1931 ntBASIC5.05□□□□□ -1.6
TPM4P67936 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 MAPK10-304ENST00000641341 3984 ntBASIC5.05□□□□□ -1.6
TPM4P67936 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 SNORD74.4-201ENST00000364129 80 ntBASIC5.05□□□□□ -1.6
TPM4P67936 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
TPM4P67936 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 DDX39BP2-208ENST00000453923 258 ntBASIC5.05□□□□□ -1.6
TPM4P67936 HSPE1P22-201ENST00000456856 327 ntBASIC5.05□□□□□ -1.6
TPM4P67936 SETP20-201ENST00000457046 852 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms