Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 CR383656.5-201ENST00000547616 1340 ntBASIC3.05□□□□□ -1.92
RPL39P62891 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 AL590240.1-201ENST00000334118 313 ntBASIC3.05□□□□□ -1.92
RPL39P62891 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 RNA5SP123-201ENST00000363244 119 ntBASIC3.05□□□□□ -1.92
RPL39P62891 MIR621-201ENST00000384919 96 ntBASIC3.05□□□□□ -1.92
RPL39P62891 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RPL39P62891 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.05□□□□□ -1.92
RPL39P62891 RNU2-18P-201ENST00000411224 162 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AL161631.1-201ENST00000417933 486 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.05□□□□□ -1.92
RPL39P62891 RBMY2QP-201ENST00000429799 1147 ntBASIC3.05□□□□□ -1.92
RPL39P62891 YWHAEP5-201ENST00000431545 765 ntBASIC3.05□□□□□ -1.92
RPL39P62891 TMX2P1-201ENST00000436507 708 ntBASIC3.05□□□□□ -1.92
RPL39P62891 PA2G4P6-201ENST00000438325 1197 ntBASIC3.05□□□□□ -1.92
RPL39P62891 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 AC104306.1-201ENST00000449702 371 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 RN7SL174P-201ENST00000475578 289 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC006517.1-201ENST00000480485 328 ntBASIC3.05□□□□□ -1.92
RPL39P62891 RPS26P15-201ENST00000488067 348 ntBASIC3.05□□□□□ -1.92
RPL39P62891 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 ATP5LP3-201ENST00000514223 304 ntBASIC3.05□□□□□ -1.92
RPL39P62891 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 AC008033.2-201ENST00000542626 177 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.05□□□□□ -1.92
RPL39P62891 AL352979.3-201ENST00000553515 247 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.05□□□□□ -1.92
RPL39P62891 MIR1269B-201ENST00000580405 75 ntBASIC3.05□□□□□ -1.92
RPL39P62891 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 AC087763.1-201ENST00000603391 286 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC015922.4-201ENST00000612568 690 ntBASIC3.05□□□□□ -1.92
RPL39P62891 MIR6861-201ENST00000618657 64 ntBASIC3.05□□□□□ -1.92
RPL39P62891 MIR6853-201ENST00000619642 74 ntBASIC3.05□□□□□ -1.92
RPL39P62891 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 AC138907.10-201ENST00000623708 983 ntBASIC3.05□□□□□ -1.92
RPL39P62891 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
RPL39P62891 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.05□□□□□ -1.92
RPL39P62891 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RPL39P62891 OR14L1P-202ENST00000641545 3009 ntBASIC3.05□□□□□ -1.92
RPL39P62891 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RPL39P62891 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.05□□□□□ -1.92
RPL39P62891 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.04□□□□□ -1.92
RPL39P62891 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPL39P62891 SAMMSON-213ENST00000641336 1521 ntBASIC3.04□□□□□ -1.92
RPL39P62891 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 AC018555.1-201ENST00000567548 1980 ntBASIC3.04□□□□□ -1.92
RPL39P62891 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.04□□□□□ -1.92
RPL39P62891 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 MIR659-201ENST00000384963 97 ntBASIC3.04□□□□□ -1.92
RPL39P62891 AL391361.1-201ENST00000405580 489 ntBASIC3.04□□□□□ -1.92
RPL39P62891 SNRPFP1-201ENST00000414761 252 ntBASIC3.04□□□□□ -1.92
RPL39P62891 RBMY1KP-201ENST00000423480 476 ntBASIC3.04□□□□□ -1.92
RPL39P62891 AC005154.2-201ENST00000438110 379 ntBASIC3.04□□□□□ -1.92
RPL39P62891 FGF7P3-201ENST00000454645 303 ntBASIC3.04□□□□□ -1.92
RPL39P62891 RPL7P22-201ENST00000466005 733 ntBASIC3.04□□□□□ -1.92
RPL39P62891 RPL35AP15-201ENST00000468042 339 ntBASIC3.04□□□□□ -1.92
RPL39P62891 RPL7P51-201ENST00000490532 749 ntBASIC3.04□□□□□ -1.92
RPL39P62891 HMGB3P13-201ENST00000511263 607 ntBASIC3.04□□□□□ -1.92
RPL39P62891 RNA5SP92-201ENST00000516437 110 ntBASIC3.04□□□□□ -1.92
RPL39P62891 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.04□□□□□ -1.92
RPL39P62891 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RPL39P62891 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.04□□□□□ -1.92
RPL39P62891 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.04□□□□□ -1.92
RPL39P62891 AC016180.1-201ENST00000567945 403 ntBASIC3.04□□□□□ -1.92
RPL39P62891 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.04□□□□□ -1.92
RPL39P62891 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.04□□□□□ -1.92
RPL39P62891 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.04□□□□□ -1.92
RPL39P62891 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 MIR4727-201ENST00000622232 55 ntBASIC3.04□□□□□ -1.92
RPL39P62891 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.04□□□□□ -1.92
RPL39P62891 AC008785.1-201ENST00000624475 456 ntBASIC3.04□□□□□ -1.92
RPL39P62891 FP325313.1-201ENST00000638228 703 ntBASIC3.04□□□□□ -1.92
RPL39P62891 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.04□□□□□ -1.92
RPL39P62891 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.04□□□□□ -1.92
RPL39P62891 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RPL39P62891 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RPL39P62891 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.03□□□□□ -1.92
RPL39P62891 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RPL39P62891 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms