Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
AP3S2P59780 AL590762.2-201ENST00000395798 571 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.98□□□□□ -1.77
AP3S2P59780 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 HLA-N-201ENST00000437516 135 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 CYCSP12-201ENST00000437729 300 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 RPL23AP2-201ENST00000471227 466 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 HNRNPKP5-201ENST00000515300 253 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.98□□□□□ -1.77
AP3S2P59780 OR7E128P-201ENST00000532736 1024 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 AC093249.4-201ENST00000564755 259 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC008536.1-201ENST00000602872 669 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC067773.1-201ENST00000603284 1094 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC095055.1-201ENST00000603472 1113 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AL139395.1-201ENST00000603662 160 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 SUGT1P3-202ENST00000604259 383 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC020634.1-201ENST00000608701 549 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 MIR4727-201ENST00000622232 55 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC073592.6-201ENST00000624271 415 ntBASIC3.98□□□□□ -1.77
AP3S2P59780 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
AP3S2P59780 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S2P59780 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S2P59780 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S2P59780 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.97□□□□□ -1.77
AP3S2P59780 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
AP3S2P59780 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP3S2P59780 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 AL391422.1-201ENST00000402155 436 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S2P59780 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 RAC1P3-201ENST00000416129 580 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC062016.2-201ENST00000420950 676 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC079807.1-201ENST00000429993 481 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 ELOCP18-201ENST00000434209 337 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC090142.1-201ENST00000465776 462 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC009127.1-201ENST00000467090 155 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC092905.1-201ENST00000467527 949 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 RPL35AP19-201ENST00000469425 329 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 IGHV3-32-201ENST00000519182 355 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 OR5AZ1P-201ENST00000527448 943 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 UBTFL9-201ENST00000534504 1148 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC234775.3-201ENST00000564612 656 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S2P59780 FO393422.1-201ENST00000603908 708 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S2P59780 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 OR7A19P-201ENST00000608051 733 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S2P59780 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 AL121873.1-201ENST00000616013 524 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC009318.3-201ENST00000616916 503 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AL022401.1-201ENST00000619498 108 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 RMST_9.1-201ENST00000619945 193 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AL691477.1-201ENST00000624398 162 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 AC009452.1-201ENST00000640823 606 ntBASIC3.97□□□□□ -1.77
AP3S2P59780 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S2P59780 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S2P59780 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms