Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC093535.2-201ENST00000624769 2326 ntBASIC6.13□□□□□ -1.43
RHBDL3P58872 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RHBDL3P58872 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RHBDL3P58872 RNVU1-6-201ENST00000364688 164 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 RN7SKP153-201ENST00000365026 316 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 RNU6-354P-201ENST00000383862 107 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 SNORA56-201ENST00000383966 129 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 RNU6-468P-201ENST00000384003 109 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 RNU6-610P-201ENST00000384264 107 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 HMGB3P19-201ENST00000403971 560 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 COX6B1P1-201ENST00000415962 213 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 AC083899.2-201ENST00000423285 1376 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 RPL37P3-201ENST00000456825 293 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 TRBV8-2-201ENST00000475637 270 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC097173.1-201ENST00000505862 819 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC104108.1-201ENST00000509930 412 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC111000.6-201ENST00000514471 709 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AP003355.1-201ENST00000518956 587 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 AC021006.3-201ENST00000530771 192 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 GCSHP4-201ENST00000538792 439 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDL3P58872 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC018645.2-201ENST00000609151 472 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDL3P58872 MIR6839-201ENST00000620425 113 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 CR392039.4-201ENST00000624968 501 ntBASIC6.12□□□□□ -1.43
RHBDL3P58872 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDL3P58872 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDL3P58872 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDL3P58872 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 RN7SKP149-201ENST00000363008 344 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RHBDL3P58872 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 OR5AW1P-201ENST00000426334 1006 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC009784.1-201ENST00000426484 460 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC016772.1-201ENST00000444170 1261 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AL096829.2-201ENST00000446582 742 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 RN7SL197P-201ENST00000466981 299 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC022133.1-201ENST00000490961 571 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.11□□□□□ -1.43
RHBDL3P58872 MRPS33P2-201ENST00000507850 322 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC011611.5-201ENST00000552477 578 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC009117.1-201ENST00000563948 554 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AL390726.5-202ENST00000564800 256 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC011487.3-201ENST00000593607 453 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC123768.4-201ENST00000616244 701 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 AP003476.1-201ENST00000623984 516 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 CDRT1-208ENST00000630868 794 ntBASIC6.11□□□□□ -1.43
RHBDL3P58872 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDL3P58872 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms