Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPL7AP61-201ENST00000443410 636 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN6P56747 AC004980.3-201ENST00000447046 365 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 RPL7P32-201ENST00000457119 744 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 RPL7AP52-201ENST00000458096 790 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 AC091167.1-201ENST00000492017 396 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN6P56747 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 AC026688.1-201ENST00000520639 1168 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 BUD31P1-201ENST00000521828 359 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 LSM3P2-201ENST00000551246 273 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN6P56747 RN7SL652P-201ENST00000577769 300 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN6P56747 AC024941.1-201ENST00000612250 334 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN6P56747 ZYXP1-201ENST00000617638 118 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AP003400.2-201ENST00000624036 666 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 THAP12P5-201ENST00000405864 2275 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 ASNSP1-204ENST00000641977 1664 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 AC104118.1-201ENST00000607625 1589 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN6P56747 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN6P56747 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN6P56747 AL603750.1-201ENST00000624216 1717 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AC017079.1-201ENST00000333650 415 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN6P56747 RNU6-729P-201ENST00000384399 107 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 CTSL3P-202ENST00000412179 788 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 RPL7AP25-201ENST00000423357 805 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN6P56747 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 RPL12P18-201ENST00000437175 325 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 CYCSP24-201ENST00000445119 316 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 AC079168.2-201ENST00000453977 416 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN6P56747 RPL23AP24-201ENST00000458203 385 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AC107015.1-201ENST00000466902 747 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN6P56747 SNORA31.9-201ENST00000516429 84 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 OR8G5-201ENST00000524943 1041 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 AC105129.1-201ENST00000560250 297 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 MIR4472-2-201ENST00000582069 67 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 AC008782.1-201ENST00000603386 430 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 AC006363.1-201ENST00000603806 463 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CLDN6P56747 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN6P56747 AL606537.1-201ENST00000607258 2011 ntBASIC4.56□□□□□ -1.68
CLDN6P56747 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN6P56747 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN6P56747 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN6P56747 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN6P56747 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN6P56747 IQCB2P-201ENST00000401788 1633 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN6P56747 SNORA73.1-201ENST00000363107 205 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN6P56747 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN6P56747 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN6P56747 RN7SL441P-201ENST00000492388 296 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN6P56747 OR8A2P-201ENST00000528631 952 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN6P56747 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN6P56747 BNIP3P33-201ENST00000598912 569 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 AC005191.1-201ENST00000603950 358 ntBASIC4.55□□□□□ -1.68
CLDN6P56747 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms