Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 MTND3P21-201ENST00000433774 331 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 PPIAP13-201ENST00000434706 478 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 ACTR3P2-201ENST00000439585 1257 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 EEF1E1P1-201ENST00000446998 430 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 VN1R10P-201ENST00000447106 875 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 RPS15AP1-201ENST00000457423 391 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 MTCO3P38-201ENST00000468910 766 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 OR9A1P-202ENST00000484361 945 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 RN7SL714P-201ENST00000487050 298 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC023818.1-201ENST00000498379 384 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 NPM1P27-201ENST00000502784 830 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 OR4D12P-201ENST00000509361 911 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 RNU6-488P-201ENST00000515918 99 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 RNU6-202P-201ENST00000515998 96 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 MED28P5-201ENST00000528254 438 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC036111.2-201ENST00000533247 901 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 AL121579.2-201ENST00000555466 590 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC084757.1-201ENST00000559987 490 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC068135.2-201ENST00000569293 1028 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC090970.3-201ENST00000612566 866 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC016769.4-201ENST00000616893 535 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 OR5H6-203ENST00000642105 978 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 WBP11P1-201ENST00000562560 1931 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 DCAF13P1-201ENST00000495256 1330 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 AC016716.1-201ENST00000265882 708 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 SNRPEP3-201ENST00000338402 276 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 RNU5E-5P-201ENST00000365379 116 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 SNORA40.3-201ENST00000390964 122 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 BTF3P7-201ENST00000407097 488 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 RNU2-28P-201ENST00000410457 189 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 U3.43-201ENST00000410734 213 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AL139128.1-201ENST00000413921 941 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AIMP1P1-201ENST00000418670 937 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 RPSAP65-201ENST00000429660 595 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 VDAC1P6-201ENST00000430062 855 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 ZYG11AP1-201ENST00000430329 837 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC108479.1-201ENST00000431142 427 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC092427.1-201ENST00000439177 601 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 DNAJC19P4-201ENST00000440115 345 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 TRIM60P16-201ENST00000444048 694 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 RPL23AP15-201ENST00000450202 459 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC023424.2-201ENST00000493479 777 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC021678.1-201ENST00000505195 936 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 HSD3BP3-201ENST00000514706 994 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms