Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FABP7P2-201ENST00000429946 379 ntBASIC4.81□□□□□ -1.64
CDH4P55283 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 AC108463.1-201ENST00000450258 347 ntBASIC4.81□□□□□ -1.64
CDH4P55283 TPT1P1-201ENST00000458495 518 ntBASIC4.81□□□□□ -1.64
CDH4P55283 RPL36AP41-201ENST00000493820 306 ntBASIC4.81□□□□□ -1.64
CDH4P55283 RNA5SP303-201ENST00000516192 130 ntBASIC4.81□□□□□ -1.64
CDH4P55283 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 CD24P2-201ENST00000565486 219 ntBASIC4.81□□□□□ -1.64
CDH4P55283 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH4P55283 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH4P55283 AL137072.1-201ENST00000603444 466 ntBASIC4.81□□□□□ -1.64
CDH4P55283 GMCL1P2-201ENST00000605230 823 ntBASIC4.81□□□□□ -1.64
CDH4P55283 AC015722.2-201ENST00000622210 551 ntBASIC4.81□□□□□ -1.64
CDH4P55283 AC015804.1-201ENST00000622935 435 ntBASIC4.81□□□□□ -1.64
CDH4P55283 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH4P55283 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 THAP12P5-201ENST00000405864 2275 ntBASIC4.81□□□□□ -1.64
CDH4P55283 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 AL031119.1-201ENST00000404707 1879 ntBASIC4.81□□□□□ -1.64
CDH4P55283 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH4P55283 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH4P55283 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH4P55283 AL049697.2-201ENST00000403708 294 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC119751.6-201ENST00000416712 186 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC104651.2-201ENST00000447549 528 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC022336.1-201ENST00000475510 337 ntBASIC4.8□□□□□ -1.64
CDH4P55283 NIP7P2-201ENST00000485801 544 ntBASIC4.8□□□□□ -1.64
CDH4P55283 MTCO3P42-201ENST00000509488 518 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 MTCO3P39-201ENST00000514812 518 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 AC109635.6-201ENST00000525487 1113 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH4P55283 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 AC073091.2-201ENST00000603205 907 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC119501.1-201ENST00000603646 475 ntBASIC4.8□□□□□ -1.64
CDH4P55283 MIR6820-201ENST00000611508 62 ntBASIC4.8□□□□□ -1.64
CDH4P55283 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH4P55283 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
CDH4P55283 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH4P55283 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH4P55283 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH4P55283 OR10AB1P-202ENST00000641219 1686 ntBASIC4.8□□□□□ -1.64
CDH4P55283 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
CDH4P55283 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 MFSD8-216ENST00000641147 4009 ntBASIC4.79□□□□□ -1.64
CDH4P55283 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 AC125257.1-201ENST00000560400 2930 ntBASIC4.79□□□□□ -1.64
CDH4P55283 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 OR4K15-201ENST00000305051 1216 ntBASIC4.79□□□□□ -1.64
CDH4P55283 SNORA70F-201ENST00000384142 135 ntBASIC4.79□□□□□ -1.64
CDH4P55283 RNA5SP397-201ENST00000391323 118 ntBASIC4.79□□□□□ -1.64
CDH4P55283 RPS4XP9-201ENST00000405151 780 ntBASIC4.79□□□□□ -1.64
CDH4P55283 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH4P55283 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 AC092570.3-201ENST00000420113 693 ntBASIC4.79□□□□□ -1.64
CDH4P55283 AC013470.3-201ENST00000420252 1194 ntBASIC4.79□□□□□ -1.64
CDH4P55283 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH4P55283 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH4P55283 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 AC008897.1-201ENST00000494006 347 ntBASIC4.79□□□□□ -1.64
CDH4P55283 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH4P55283 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH4P55283 AL133406.3-201ENST00000606817 541 ntBASIC4.79□□□□□ -1.64
CDH4P55283 AL592494.3-201ENST00000609485 464 ntBASIC4.79□□□□□ -1.64
CDH4P55283 AC004232.3-201ENST00000622977 525 ntBASIC4.79□□□□□ -1.64
CDH4P55283 U3.53-201ENST00000628922 216 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms