Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC073387.2-201ENST00000604797 784 ntBASIC5.61□□□□□ -1.51
CACNA2D1P54289 AC015849.2-201ENST00000605738 409 ntBASIC5.61□□□□□ -1.51
CACNA2D1P54289 AL034549.2-201ENST00000618285 3373 ntBASIC5.61□□□□□ -1.51
CACNA2D1P54289 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.61□□□□□ -1.51
CACNA2D1P54289 AC093909.5-201ENST00000621839 1799 ntBASIC5.61□□□□□ -1.51
CACNA2D1P54289 AC083865.1-201ENST00000636634 831 ntBASIC5.61□□□□□ -1.51
CACNA2D1P54289 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CACNA2D1P54289 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
CACNA2D1P54289 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA2D1P54289 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CACNA2D1P54289 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL137141.1-201ENST00000624622 4836 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 RNU6-207P-201ENST00000384137 107 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 RNU6-481P-201ENST00000384194 107 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 MTND4P22-201ENST00000413116 1169 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 VN1R31P-201ENST00000417498 730 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 OR5M12P-201ENST00000423388 929 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 EI24P4-201ENST00000423683 1078 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 VN1R42P-201ENST00000424651 344 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC093655.2-201ENST00000425735 631 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL589823.1-201ENST00000429577 183 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 ARF4P4-201ENST00000439608 520 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 RPL31P20-201ENST00000449593 360 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 ZNF886P-201ENST00000450781 723 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC026348.1-201ENST00000462549 1053 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 CBX1P5-201ENST00000475330 559 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 RPS18P6-201ENST00000476880 458 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 OR5M14P-201ENST00000506803 618 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 SEPT10P1-201ENST00000517342 1162 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 HAUS8P1-201ENST00000549005 542 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC109446.2-201ENST00000567872 497 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC016839.1-201ENST00000578162 867 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 CCDC58P3-201ENST00000590792 430 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL158042.1-201ENST00000605338 460 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 AL021707.7-201ENST00000607991 416 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC011755.1-201ENST00000623763 2049 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CACNA2D1P54289 AC093591.2-201ENST00000565254 3843 ntBASIC5.6□□□□□ -1.51
CACNA2D1P54289 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CACNA2D1P54289 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA2D1P54289 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA2D1P54289 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA2D1P54289 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA2D1P54289 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA2D1P54289 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 RANP4-201ENST00000413361 655 ntBASIC5.59□□□□□ -1.51
CACNA2D1P54289 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.59□□□□□ -1.51
CACNA2D1P54289 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms