Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-1P43699 FO393414.1-201ENST00000428697 1184 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC114973.1-201ENST00000429057 632 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AL389925.1-201ENST00000432257 728 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 OR6D1P-201ENST00000436165 939 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 NDUFS5P5-201ENST00000437256 321 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC092170.1-201ENST00000440211 356 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC002542.1-201ENST00000440683 193 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC068135.1-201ENST00000446164 246 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AL672138.1-201ENST00000450604 1015 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC098826.2-201ENST00000452011 651 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 OFD1P3Y-201ENST00000453312 783 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC079168.1-201ENST00000458741 345 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC020898.1-201ENST00000474167 787 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC096571.1-202ENST00000506634 735 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-1P43699 OR5H7P-201ENST00000514084 930 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 RN7SKP70-201ENST00000516655 271 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 RNU6-347P-201ENST00000516658 105 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 SCARNA16.4-201ENST00000516956 187 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 MRPS16P1-201ENST00000523462 412 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 TOMM20P1-201ENST00000534518 427 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX2-1P43699 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 DPRXP4-201ENST00000578053 568 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-1P43699 EIF1P6-201ENST00000600054 334 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AC009597.2-201ENST00000604659 592 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 AL512427.1-201ENST00000618593 349 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 OR8G3P-202ENST00000641572 1255 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 OR8A1-204ENST00000642111 1145 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC106754.1-201ENST00000562632 1513 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-1P43699 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 SCN1A-220ENST00000641603 12506 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 RNA5SP273-201ENST00000362484 113 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RNA5SP477-201ENST00000362639 119 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RNU6-236P-201ENST00000363886 106 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 RNU6-178P-201ENST00000384631 104 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 MTATP6P31-201ENST00000406985 692 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 MIR1271-201ENST00000408537 86 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC096533.1-201ENST00000411645 353 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 SETP15-201ENST00000412724 337 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC013429.2-201ENST00000418798 781 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC110602.1-201ENST00000437414 318 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 FABP5P3-201ENST00000437960 408 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AL589765.3-201ENST00000446084 462 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 NOP56P2-201ENST00000447491 769 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 MTND2P8-201ENST00000450555 1025 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 VDAC2P4-201ENST00000452925 711 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AL591473.1-201ENST00000464297 313 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC104164.3-201ENST00000467363 1258 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RN7SL189P-201ENST00000468631 289 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC008565.1-201ENST00000509046 885 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC104108.1-201ENST00000509930 412 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC138938.1-201ENST00000515431 782 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RN7SKP46-201ENST00000515942 234 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RNA5SP303-201ENST00000516192 130 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 Y_RNA.667-201ENST00000516212 107 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RNA5SP473-201ENST00000516402 125 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RNA5SP438-201ENST00000516561 112 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC060775.1-201ENST00000518241 520 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AP001207.2-201ENST00000519490 539 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms