Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RORAP35398 TBCAP2-201ENST00000416175 326 ntBASIC4.62□□□□□ -1.67
RORAP35398 AC092570.3-201ENST00000420113 693 ntBASIC4.62□□□□□ -1.67
RORAP35398 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.62□□□□□ -1.67
RORAP35398 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.62□□□□□ -1.67
RORAP35398 AL035551.1-201ENST00000446931 348 ntBASIC4.62□□□□□ -1.67
RORAP35398 AC010733.1-201ENST00000451515 401 ntBASIC4.62□□□□□ -1.67
RORAP35398 APOOP2-201ENST00000461561 539 ntBASIC4.62□□□□□ -1.67
RORAP35398 AC006463.2-201ENST00000473326 348 ntBASIC4.62□□□□□ -1.67
RORAP35398 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RORAP35398 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.62□□□□□ -1.67
RORAP35398 RN7SKP276-201ENST00000516242 268 ntBASIC4.62□□□□□ -1.67
RORAP35398 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.62□□□□□ -1.67
RORAP35398 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.62□□□□□ -1.67
RORAP35398 AC109635.6-201ENST00000525487 1113 ntBASIC4.62□□□□□ -1.67
RORAP35398 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RORAP35398 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
RORAP35398 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.62□□□□□ -1.67
RORAP35398 AC010424.2-201ENST00000607594 443 ntBASIC4.62□□□□□ -1.67
RORAP35398 AC131238.1-201ENST00000617135 328 ntBASIC4.62□□□□□ -1.67
RORAP35398 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.62□□□□□ -1.67
RORAP35398 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.62□□□□□ -1.67
RORAP35398 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RORAP35398 AC100778.3-201ENST00000580060 1750 ntBASIC4.62□□□□□ -1.67
RORAP35398 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
RORAP35398 AP001273.1-201ENST00000624493 3152 ntBASIC4.62□□□□□ -1.67
RORAP35398 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RORAP35398 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.62□□□□□ -1.67
RORAP35398 MAPK10-263ENST00000641052 4307 ntBASIC4.62□□□□□ -1.67
RORAP35398 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.62□□□□□ -1.67
RORAP35398 AC005332.5-201ENST00000591222 2919 ntBASIC4.62□□□□□ -1.67
RORAP35398 AL672167.1-204ENST00000641875 3017 ntBASIC4.62□□□□□ -1.67
RORAP35398 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RORAP35398 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 AC093535.2-201ENST00000624769 2326 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC126323.6-202ENST00000568092 3511 ntBASIC4.61□□□□□ -1.67
RORAP35398 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
RORAP35398 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 MAPK10-349ENST00000641767 3661 ntBASIC4.61□□□□□ -1.67
RORAP35398 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
RORAP35398 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
RORAP35398 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RORAP35398 RNA5SP505-201ENST00000364748 108 ntBASIC4.61□□□□□ -1.67
RORAP35398 U3.30-201ENST00000391308 210 ntBASIC4.61□□□□□ -1.67
RORAP35398 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 EIF4A1P3-201ENST00000411521 244 ntBASIC4.61□□□□□ -1.67
RORAP35398 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.61□□□□□ -1.67
RORAP35398 AC119751.6-201ENST00000416712 186 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC104333.2-201ENST00000422630 192 ntBASIC4.61□□□□□ -1.67
RORAP35398 RPL35AP21-201ENST00000437667 333 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC005154.2-201ENST00000438110 379 ntBASIC4.61□□□□□ -1.67
RORAP35398 AL357520.1-201ENST00000441557 453 ntBASIC4.61□□□□□ -1.67
RORAP35398 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 CCDC75P1-201ENST00000469247 791 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC096741.1-201ENST00000472250 846 ntBASIC4.61□□□□□ -1.67
RORAP35398 RN7SL860P-201ENST00000473738 223 ntBASIC4.61□□□□□ -1.67
RORAP35398 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.61□□□□□ -1.67
RORAP35398 SCARNA22-201ENST00000503991 125 ntBASIC4.61□□□□□ -1.67
RORAP35398 OR51K1P-201ENST00000510214 950 ntBASIC4.61□□□□□ -1.67
RORAP35398 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.61□□□□□ -1.67
RORAP35398 SOX5P1-201ENST00000524155 1127 ntBASIC4.61□□□□□ -1.67
RORAP35398 OR5AN2P-201ENST00000534535 896 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 PDCD5P1-201ENST00000543528 309 ntBASIC4.61□□□□□ -1.67
RORAP35398 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 AGGF1P9-201ENST00000561884 913 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.61□□□□□ -1.67
RORAP35398 RN7SL690P-201ENST00000582087 240 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC010435.1-201ENST00000623353 1177 ntBASIC4.61□□□□□ -1.67
RORAP35398 AC243960.7-201ENST00000623532 707 ntBASIC4.61□□□□□ -1.67
RORAP35398 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.61□□□□□ -1.67
RORAP35398 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.61□□□□□ -1.67
RORAP35398 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RORAP35398 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.61□□□□□ -1.67
RORAP35398 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RORAP35398 NCLP2-201ENST00000416078 1462 ntBASIC4.61□□□□□ -1.67
RORAP35398 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.61□□□□□ -1.67
RORAP35398 OR51H2P-202ENST00000641424 3046 ntBASIC4.6□□□□□ -1.67
RORAP35398 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RORAP35398 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
RORAP35398 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms