Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CDH12P1-201ENST00000518435 295 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.59□□□□□ -1.67
SHMT2P34897 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC063949.1-201ENST00000552900 865 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.59□□□□□ -1.67
SHMT2P34897 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC000123.3-201ENST00000624029 4975 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.59□□□□□ -1.67
SHMT2P34897 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.59□□□□□ -1.68
SHMT2P34897 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SHMT2P34897 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SHMT2P34897 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.59□□□□□ -1.68
SHMT2P34897 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHMT2P34897 AL672167.2-201ENST00000377164 879 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHMT2P34897 RPL37P18-201ENST00000411602 243 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 CASKP1-201ENST00000412870 582 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.58□□□□□ -1.68
SHMT2P34897 MTCO1P51-201ENST00000427672 1060 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 AL591363.1-201ENST00000450091 483 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 FCF1P7-201ENST00000451185 558 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC079168.2-201ENST00000453977 416 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 RPS29P22-201ENST00000472363 168 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 RPL21P6-201ENST00000479171 504 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHMT2P34897 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.58□□□□□ -1.68
SHMT2P34897 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 RN7SL652P-201ENST00000577769 300 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 RN7SL176P-201ENST00000580352 264 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.58□□□□□ -1.68
SHMT2P34897 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC087283.1-201ENST00000604029 1074 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 QTRT1P1-201ENST00000604344 1078 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC067838.1-201ENST00000606064 577 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC091979.2-201ENST00000607514 214 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 MIR6780A-201ENST00000615089 68 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.58□□□□□ -1.68
SHMT2P34897 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.58□□□□□ -1.68
SHMT2P34897 AL596275.2-204ENST00000641628 552 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 AL596275.2-206ENST00000641957 626 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
SHMT2P34897 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SHMT2P34897 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHMT2P34897 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.58□□□□□ -1.68
SHMT2P34897 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
SHMT2P34897 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 CASC19-204ENST00000641001 2055 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.57□□□□□ -1.68
SHMT2P34897 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHMT2P34897 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHMT2P34897 AL590240.1-201ENST00000334118 313 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 RNVU1-6-201ENST00000364688 164 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AL590762.2-201ENST00000395798 571 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 Z98745.1-201ENST00000402553 494 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.57□□□□□ -1.68
SHMT2P34897 AL590139.1-201ENST00000416267 400 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AC140479.3-201ENST00000418944 1126 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AL359265.2-201ENST00000434367 631 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.57□□□□□ -1.68
SHMT2P34897 AL513533.1-201ENST00000453728 415 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AC090142.1-201ENST00000465776 462 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AC022795.1-201ENST00000473808 480 ntBASIC4.57□□□□□ -1.68
SHMT2P34897 AC007686.1-201ENST00000488511 463 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms