Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 AC107021.2-201ENST00000567714 2095 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM4SF1P30408 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 PROS2P-201ENST00000474651 1951 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TM4SF1P30408 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC011447.7-201ENST00000624228 1590 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC009643.2-201ENST00000603543 1448 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 AL450345.1-202ENST00000605741 3881 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 RPL7P57-201ENST00000423238 740 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC114755.5-201ENST00000447760 831 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 SNORA84-201ENST00000459229 133 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 EIF2S2P4-201ENST00000461070 984 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 AC104763.1-201ENST00000475274 360 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 AC073073.1-201ENST00000493920 463 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 SNORA31.9-201ENST00000516429 84 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC023043.4-201ENST00000612081 449 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC009120.7-201ENST00000623452 780 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 AC006453.5-201ENST00000636451 619 ntBASIC5.84□□□□□ -1.47
TM4SF1P30408 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.84□□□□□ -1.47
TM4SF1P30408 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.84□□□□□ -1.47
TM4SF1P30408 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TM4SF1P30408 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TM4SF1P30408 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TM4SF1P30408 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.84□□□□□ -1.48
TM4SF1P30408 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.84□□□□□ -1.48
TM4SF1P30408 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 AC093671.1-201ENST00000624981 2929 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TM4SF1P30408 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.83□□□□□ -1.48
TM4SF1P30408 SNORA71.2-201ENST00000364941 134 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 MIR421-201ENST00000365696 85 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 AC092162.1-201ENST00000432828 434 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.83□□□□□ -1.48
TM4SF1P30408 AL500527.1-201ENST00000448532 255 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.83□□□□□ -1.48
TM4SF1P30408 AC105137.1-201ENST00000484355 562 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 PPM1AP1-201ENST00000502740 1135 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 AP003730.1-201ENST00000524605 285 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 BMS1P7-201ENST00000602440 1052 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 AL133247.2-201ENST00000603236 482 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 AC073137.1-201ENST00000605636 634 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.83□□□□□ -1.48
TM4SF1P30408 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.83□□□□□ -1.48
TM4SF1P30408 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.83□□□□□ -1.48
TM4SF1P30408 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.83□□□□□ -1.48
TM4SF1P30408 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TM4SF1P30408 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.83□□□□□ -1.48
TM4SF1P30408 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
TM4SF1P30408 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TM4SF1P30408 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC011933.1-201ENST00000413334 321 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 BMS1P19-201ENST00000433925 393 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 AC116533.1-201ENST00000459748 321 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 RPL23AP53-201ENST00000521854 457 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms