Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.53□□□□□ -1.52
BDNFP23560 AC124944.2-201ENST00000429866 1242 ntBASIC5.53□□□□□ -1.52
BDNFP23560 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 MTND4P15-201ENST00000437913 1033 ntBASIC5.53□□□□□ -1.52
BDNFP23560 RPS29P10-201ENST00000439197 166 ntBASIC5.53□□□□□ -1.52
BDNFP23560 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 AC092647.2-201ENST00000452998 253 ntBASIC5.53□□□□□ -1.52
BDNFP23560 CBX1P5-201ENST00000475330 559 ntBASIC5.53□□□□□ -1.52
BDNFP23560 RPL7AP6-201ENST00000477943 801 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC090114.3-201ENST00000479267 829 ntBASIC5.53□□□□□ -1.52
BDNFP23560 HMGB1P21-201ENST00000502313 581 ntBASIC5.53□□□□□ -1.52
BDNFP23560 NDUFA5P12-201ENST00000503796 343 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 OR8A2P-201ENST00000528631 952 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.53□□□□□ -1.52
BDNFP23560 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.53□□□□□ -1.52
BDNFP23560 AC027104.1-201ENST00000563702 681 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.53□□□□□ -1.52
BDNFP23560 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.53□□□□□ -1.52
BDNFP23560 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.53□□□□□ -1.52
BDNFP23560 AC087763.1-201ENST00000603391 286 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC079880.2-201ENST00000603790 1213 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC010632.3-201ENST00000611377 369 ntBASIC5.53□□□□□ -1.52
BDNFP23560 ATE1-AS1-202ENST00000636460 506 ntBASIC5.53□□□□□ -1.52
BDNFP23560 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BDNFP23560 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BDNFP23560 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BDNFP23560 AC006210.2-201ENST00000367074 1545 ntBASIC5.53□□□□□ -1.52
BDNFP23560 PANDAR-201ENST00000629595 1506 ntBASIC5.53□□□□□ -1.52
BDNFP23560 AC090229.1-201ENST00000590983 1609 ntBASIC5.52□□□□□ -1.53
BDNFP23560 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
BDNFP23560 AC000123.3-201ENST00000624029 4975 ntBASIC5.52□□□□□ -1.53
BDNFP23560 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BDNFP23560 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BDNFP23560 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 RN7SKP74-201ENST00000362849 309 ntBASIC5.52□□□□□ -1.53
BDNFP23560 RN7SKP145-201ENST00000363291 303 ntBASIC5.52□□□□□ -1.53
BDNFP23560 OR8V1P-201ENST00000395193 873 ntBASIC5.52□□□□□ -1.53
BDNFP23560 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.52□□□□□ -1.53
BDNFP23560 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 AL450992.3-201ENST00000413192 568 ntBASIC5.52□□□□□ -1.53
BDNFP23560 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
BDNFP23560 AL121882.1-201ENST00000422893 417 ntBASIC5.52□□□□□ -1.53
BDNFP23560 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 PNRC2P1-201ENST00000423940 420 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC009784.1-201ENST00000426484 460 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC093422.3-201ENST00000428506 305 ntBASIC5.52□□□□□ -1.53
BDNFP23560 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.52□□□□□ -1.53
BDNFP23560 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 ARL5AP2-201ENST00000444698 533 ntBASIC5.52□□□□□ -1.53
BDNFP23560 NOP56P2-201ENST00000447491 769 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 RPL7P41-201ENST00000485823 957 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC022133.1-201ENST00000490961 571 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC109462.1-201ENST00000491087 368 ntBASIC5.52□□□□□ -1.53
BDNFP23560 RPL23AP73-201ENST00000492507 471 ntBASIC5.52□□□□□ -1.53
BDNFP23560 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 RN7SKP66-201ENST00000516681 231 ntBASIC5.52□□□□□ -1.53
BDNFP23560 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
BDNFP23560 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 AC010306.1-201ENST00000523223 1117 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.52□□□□□ -1.53
BDNFP23560 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.52□□□□□ -1.53
BDNFP23560 AC010503.3-201ENST00000594355 540 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 AC008814.1-201ENST00000603797 406 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.52□□□□□ -1.53
BDNFP23560 AC023509.5-201ENST00000617434 807 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC090510.2-201ENST00000617465 629 ntBASIC5.52□□□□□ -1.53
BDNFP23560 AC135068.12-201ENST00000637370 931 ntBASIC5.52□□□□□ -1.53
BDNFP23560 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
BDNFP23560 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BDNFP23560 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BDNFP23560 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BDNFP23560 AC100871.1-201ENST00000507871 1456 ntBASIC5.51□□□□□ -1.53
BDNFP23560 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.51□□□□□ -1.53
BDNFP23560 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 OR9G4-201ENST00000302957 984 ntBASIC5.51□□□□□ -1.53
BDNFP23560 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.51□□□□□ -1.53
BDNFP23560 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BDNFP23560 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms