Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 LYPLA1P1-201ENST00000434514 622 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 AL022238.1-201ENST00000442557 355 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 GAPDHP23-201ENST00000444823 993 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC005077.1-201ENST00000449226 375 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AL606490.1-201ENST00000452266 765 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 DNAJB5P1-201ENST00000454004 806 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 RANP2-201ENST00000456833 229 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 SETP20-201ENST00000457046 852 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.91□□□□□ -1.3
HOXD8P13378 RN7SL101P-201ENST00000496350 279 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC114786.4-201ENST00000508771 728 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC091133.4-201ENST00000511142 308 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 PAICSP4-201ENST00000517543 1253 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 IGJP1-201ENST00000522682 475 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.91□□□□□ -1.3
HOXD8P13378 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC239860.2-201ENST00000525886 270 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 MIR3913-1-201ENST00000577744 102 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.91□□□□□ -1.3
HOXD8P13378 AC008555.7-201ENST00000605008 583 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC055876.5-201ENST00000605667 259 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC006924.1-201ENST00000610750 559 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC011472.4-201ENST00000615848 491 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 AL136228.1-201ENST00000622221 319 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD8P13378 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD8P13378 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HOXD8P13378 AL022578.1-201ENST00000439330 1433 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 AC100871.1-201ENST00000507871 1456 ntBASIC6.91□□□□□ -1.3
HOXD8P13378 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD8P13378 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 AC110597.1-201ENST00000562669 3176 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD8P13378 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD8P13378 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HOXD8P13378 SNORA43.1-201ENST00000364863 140 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 Y_RNA.295-201ENST00000364918 102 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 RNU6-692P-201ENST00000384496 107 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RNU6-297P-201ENST00000384636 107 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 MTCO3P40-201ENST00000392516 676 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD8P13378 RNA5SP156-201ENST00000410250 110 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RN7SKP206-201ENST00000410823 293 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RPS20P15-201ENST00000412792 311 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 AC109780.2-201ENST00000413467 845 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 AL590806.1-201ENST00000415818 853 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 RPL35AP31-201ENST00000418340 337 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD8P13378 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD8P13378 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD8P13378 ATP5HP2-201ENST00000433885 485 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD8P13378 AC093716.1-201ENST00000435923 377 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 MTND4P19-201ENST00000446659 478 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 FTLP8-201ENST00000446770 267 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD8P13378 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD8P13378 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.9□□□□□ -1.3
HOXD8P13378 snoU109.1-201ENST00000459339 135 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 AC007998.1-201ENST00000474156 672 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD8P13378 AC104687.1-201ENST00000485829 412 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RN7SL193P-201ENST00000491708 276 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RNF138P1-201ENST00000502765 546 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 Y_RNA.675-201ENST00000516389 149 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 RNA5SP438-201ENST00000516561 112 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 CDC42P3-201ENST00000518493 633 ntBASIC6.9□□□□□ -1.3
HOXD8P13378 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms