Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TOP2AP11388 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TOP2AP11388 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOP2AP11388 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
TOP2AP11388 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
TOP2AP11388 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOP2AP11388 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
TOP2AP11388 LINC01881-201ENST00000416103 412 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.65□□□□□ -1.18
TOP2AP11388 RPS29P7-201ENST00000439662 171 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.65□□□□□ -1.18
TOP2AP11388 AL162151.2-201ENST00000448875 158 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 AC079804.1-201ENST00000461922 436 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 PARP4P3-201ENST00000510265 317 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.65□□□□□ -1.18
TOP2AP11388 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
TOP2AP11388 HNRNPCP4-201ENST00000571636 900 ntBASIC7.65□□□□□ -1.18
TOP2AP11388 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.65□□□□□ -1.18
TOP2AP11388 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC7.65□□□□□ -1.18
TOP2AP11388 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.65□□□□□ -1.18
TOP2AP11388 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
TOP2AP11388 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
TOP2AP11388 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.65□□□□□ -1.19
TOP2AP11388 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TOP2AP11388 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.64□□□□□ -1.19
TOP2AP11388 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
TOP2AP11388 MIR921-201ENST00000401133 56 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 AC062016.2-201ENST00000420950 676 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 CDY14P-201ENST00000431260 1014 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.64□□□□□ -1.19
TOP2AP11388 CDY12P-201ENST00000440679 1015 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 CDY13P-201ENST00000445813 1015 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 CDY23P-201ENST00000451661 1014 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 AC091959.2-201ENST00000477363 321 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TOP2AP11388 RNA5SP73-201ENST00000516744 108 ntBASIC7.64□□□□□ -1.19
TOP2AP11388 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC7.64□□□□□ -1.19
TOP2AP11388 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.64□□□□□ -1.19
TOP2AP11388 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
TOP2AP11388 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TOP2AP11388 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TOP2AP11388 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
TOP2AP11388 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
TOP2AP11388 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC7.63□□□□□ -1.19
TOP2AP11388 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.63□□□□□ -1.19
TOP2AP11388 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.63□□□□□ -1.19
TOP2AP11388 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.63□□□□□ -1.19
TOP2AP11388 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.63□□□□□ -1.19
TOP2AP11388 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.63□□□□□ -1.19
TOP2AP11388 AC091178.1-203ENST00000584586 279 ntBASIC7.63□□□□□ -1.19
TOP2AP11388 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.63□□□□□ -1.19
TOP2AP11388 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 MIR6875-201ENST00000617506 72 ntBASIC7.63□□□□□ -1.19
TOP2AP11388 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.63□□□□□ -1.19
TOP2AP11388 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOP2AP11388 AC104623.2-202ENST00000623477 4002 ntBASIC7.63□□□□□ -1.19
TOP2AP11388 ENSAP1-201ENST00000392855 326 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 RPS20P14-201ENST00000412545 360 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 RPL6P29-201ENST00000414863 865 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AC009506.2-201ENST00000420635 840 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.62□□□□□ -1.19
TOP2AP11388 DDX39BP2-208ENST00000453923 258 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 RN7SL132P-201ENST00000478131 296 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.62□□□□□ -1.19
TOP2AP11388 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.62□□□□□ -1.19
TOP2AP11388 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.62□□□□□ -1.19
TOP2AP11388 AC053481.4-201ENST00000583164 216 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AC007546.2-201ENST00000623996 360 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.62□□□□□ -1.19
TOP2AP11388 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TOP2AP11388 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOP2AP11388 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TOP2AP11388 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOP2AP11388 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TOP2AP11388 MIR208A-201ENST00000362287 71 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.62□□□□□ -1.19
TOP2AP11388 AL445584.1-201ENST00000431451 330 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.62□□□□□ -1.19
TOP2AP11388 AL512326.1-201ENST00000443050 721 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.62□□□□□ -1.19
TOP2AP11388 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.62□□□□□ -1.19
TOP2AP11388 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.62□□□□□ -1.19
TOP2AP11388 AC012442.3-202ENST00000636742 206 ntBASIC7.62□□□□□ -1.19
TOP2AP11388 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TOP2AP11388 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TOP2AP11388 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.61□□□□□ -1.19
TOP2AP11388 RLIMP1-201ENST00000339626 1680 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 AC090220.1-201ENST00000593078 1699 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms