Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC079064.1-201ENST00000528365 362 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
HMGB1P09429 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 BPTFP1-201ENST00000579209 492 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB1P09429 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC105429.2-201ENST00000610567 517 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 AC006927.2-201ENST00000639256 389 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HMGB1P09429 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC104964.3-201ENST00000606115 2860 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HMGB1P09429 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 RN7SKP145-201ENST00000363291 303 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 RNU6-353P-201ENST00000364266 108 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 RNA5SP284-201ENST00000384547 118 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 BTBD10P2-201ENST00000404779 676 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 SDHDP6-201ENST00000414693 480 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 AL133173.1-201ENST00000423458 397 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 RPS27AP6-201ENST00000427962 448 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 OR51AB1P-201ENST00000429046 620 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC010881.1-201ENST00000433830 235 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 OR6D1P-201ENST00000436165 939 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGB1P09429 AL592437.1-201ENST00000443781 492 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL050341.1-201ENST00000447743 313 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 VDAC2P4-201ENST00000452925 711 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL645937.3-201ENST00000453647 936 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 PRDX3P4-201ENST00000470828 747 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC007998.1-201ENST00000474156 672 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 RN7SL214P-201ENST00000487317 265 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 SNORD46.2-201ENST00000516021 102 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGB1P09429 MRPS21P7-201ENST00000566937 238 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 AC010547.6-201ENST00000571789 193 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 AC016542.1-201ENST00000608259 493 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 BNIP3P41-202ENST00000616656 861 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AL359742.1-201ENST00000622497 540 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB1P09429 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB1P09429 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGB1P09429 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB1P09429 AL136964.1-201ENST00000622038 2990 ntBASIC6.54□□□□□ -1.36
HMGB1P09429 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P09429 OR14L1P-202ENST00000641545 3009 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 AL445487.1-201ENST00000415694 1580 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P09429 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB1P09429 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB1P09429 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB1P09429 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P09429 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGB1P09429 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGB1P09429 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGB1P09429 SNORA70E-201ENST00000384492 135 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGB1P09429 CYCSP10-201ENST00000417973 294 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 RPL31P45-201ENST00000419532 356 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB1P09429 MED28P3-201ENST00000444288 531 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 OR52E7P-201ENST00000452394 933 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 RPL7P32-201ENST00000457119 744 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 RPS15AP1-201ENST00000457423 391 ntBASIC6.53□□□□□ -1.36
HMGB1P09429 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGB1P09429 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms