Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
MMP3P08254 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MMP3P08254 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 DHX40P1-201ENST00000588725 1412 ntBASIC5.43□□□□□ -1.54
MMP3P08254 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
MMP3P08254 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
MMP3P08254 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 AC007068.1-201ENST00000396690 844 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.43□□□□□ -1.54
MMP3P08254 AC009480.2-201ENST00000422916 432 ntBASIC5.43□□□□□ -1.54
MMP3P08254 FABP7P1-201ENST00000424004 391 ntBASIC5.43□□□□□ -1.54
MMP3P08254 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
MMP3P08254 RPL18P10-201ENST00000425606 538 ntBASIC5.43□□□□□ -1.54
MMP3P08254 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 AL512637.2-201ENST00000431287 1256 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AL606490.7-201ENST00000433136 191 ntBASIC5.43□□□□□ -1.54
MMP3P08254 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC245517.2-201ENST00000442890 346 ntBASIC5.43□□□□□ -1.54
MMP3P08254 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.43□□□□□ -1.54
MMP3P08254 AL157884.3-201ENST00000448273 1184 ntBASIC5.43□□□□□ -1.54
MMP3P08254 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.43□□□□□ -1.54
MMP3P08254 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 snoU13.1-201ENST00000459157 104 ntBASIC5.43□□□□□ -1.54
MMP3P08254 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.43□□□□□ -1.54
MMP3P08254 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 HAUS1P1-201ENST00000505275 832 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC138409.2-202ENST00000507274 458 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC034244.2-201ENST00000514668 858 ntBASIC5.43□□□□□ -1.54
MMP3P08254 RN7SKP92-201ENST00000517266 244 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 AC034205.1-201ENST00000520621 638 ntBASIC5.43□□□□□ -1.54
MMP3P08254 BUD31P1-201ENST00000521828 359 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 AL049839.1-201ENST00000556151 657 ntBASIC5.43□□□□□ -1.54
MMP3P08254 CD24P2-201ENST00000565486 219 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC022726.1-201ENST00000587475 207 ntBASIC5.43□□□□□ -1.54
MMP3P08254 QTRT1P1-201ENST00000604344 1078 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC067838.1-201ENST00000606064 577 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AL050303.3-201ENST00000613704 284 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC083809.1-201ENST00000615051 472 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC008147.4-201ENST00000617570 1204 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.43□□□□□ -1.54
MMP3P08254 RMST_5.1-201ENST00000618704 126 ntBASIC5.43□□□□□ -1.54
MMP3P08254 MIR6758-201ENST00000620653 63 ntBASIC5.43□□□□□ -1.54
MMP3P08254 AC015722.2-201ENST00000622210 551 ntBASIC5.43□□□□□ -1.54
MMP3P08254 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 AL445984.1-201ENST00000637834 659 ntBASIC5.43□□□□□ -1.54
MMP3P08254 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 AC008758.3-201ENST00000507003 1829 ntBASIC5.43□□□□□ -1.54
MMP3P08254 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 AC017002.4-201ENST00000604721 1525 ntBASIC5.43□□□□□ -1.54
MMP3P08254 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
MMP3P08254 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.43□□□□□ -1.54
MMP3P08254 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.42□□□□□ -1.54
MMP3P08254 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
MMP3P08254 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.42□□□□□ -1.54
MMP3P08254 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 AL450345.1-202ENST00000605741 3881 ntBASIC5.42□□□□□ -1.54
MMP3P08254 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
MMP3P08254 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MMP3P08254 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
MMP3P08254 OR4K15-201ENST00000305051 1216 ntBASIC5.42□□□□□ -1.54
MMP3P08254 SNORA70F-201ENST00000384142 135 ntBASIC5.42□□□□□ -1.54
MMP3P08254 MIR122-201ENST00000385044 85 ntBASIC5.42□□□□□ -1.54
MMP3P08254 AL049697.2-201ENST00000403708 294 ntBASIC5.42□□□□□ -1.54
MMP3P08254 GLUD1P9-201ENST00000420997 1173 ntBASIC5.42□□□□□ -1.54
MMP3P08254 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.42□□□□□ -1.54
MMP3P08254 CNOT7P1-201ENST00000429006 852 ntBASIC5.42□□□□□ -1.54
MMP3P08254 CYCSP11-201ENST00000436426 315 ntBASIC5.42□□□□□ -1.54
MMP3P08254 AC016831.4-201ENST00000438302 307 ntBASIC5.42□□□□□ -1.54
MMP3P08254 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms