Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 RPL7P33-201ENST00000444159 742 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.4□□□□□ -1.54
COL1A1P02452 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.4□□□□□ -1.54
COL1A1P02452 AC020593.1-201ENST00000507399 299 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 AC108475.1-201ENST00000507880 950 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.4□□□□□ -1.54
COL1A1P02452 RNA5SP303-201ENST00000516192 130 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 SNORA31.9-201ENST00000516429 84 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.4□□□□□ -1.54
COL1A1P02452 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.4□□□□□ -1.54
COL1A1P02452 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 BPIFA4P-203ENST00000603168 689 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.4□□□□□ -1.54
COL1A1P02452 AC007546.1-201ENST00000619452 559 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 RNA5SP196-201ENST00000625967 102 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.4□□□□□ -1.54
COL1A1P02452 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL1A1P02452 AL592182.3-201ENST00000642132 3304 ntBASIC5.4□□□□□ -1.55
COL1A1P02452 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
COL1A1P02452 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL1A1P02452 AC006971.1-201ENST00000407916 4486 ntBASIC5.4□□□□□ -1.55
COL1A1P02452 AL161912.2-201ENST00000565707 3007 ntBASIC5.4□□□□□ -1.55
COL1A1P02452 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 NRBF2P2-201ENST00000413087 861 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AL389915.1-201ENST00000422463 466 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 RPEP2-201ENST00000432149 701 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 BMS1P19-201ENST00000433925 393 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 NMNAT1P2-201ENST00000435192 860 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 GLRXP2-201ENST00000555594 321 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AL354984.3-201ENST00000604803 325 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC090948.2-201ENST00000607363 564 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC140479.6-201ENST00000633535 357 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL1A1P02452 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.39□□□□□ -1.55
COL1A1P02452 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.39□□□□□ -1.55
COL1A1P02452 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL1A1P02452 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL1A1P02452 MIR331-201ENST00000362302 94 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
COL1A1P02452 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 RNU1-63P-201ENST00000383902 164 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL1A1P02452 AC009237.10-201ENST00000414112 510 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC009237.5-201ENST00000414271 501 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 RPL21P91-201ENST00000429231 479 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.39□□□□□ -1.55
COL1A1P02452 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 AC105137.1-201ENST00000484355 562 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 RNA5SP446-201ENST00000515955 82 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.39□□□□□ -1.55
COL1A1P02452 AC090515.3-201ENST00000560431 315 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.39□□□□□ -1.55
COL1A1P02452 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.39□□□□□ -1.55
COL1A1P02452 AC113403.1-201ENST00000604910 193 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC010201.1-201ENST00000605051 540 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 AC245389.1-201ENST00000605141 529 ntBASIC5.39□□□□□ -1.55
COL1A1P02452 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.39□□□□□ -1.55
COL1A1P02452 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.38□□□□□ -1.55
COL1A1P02452 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.38□□□□□ -1.55
COL1A1P02452 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
COL1A1P02452 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
COL1A1P02452 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.38□□□□□ -1.55
COL1A1P02452 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AC005261.4-201ENST00000600047 1385 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL1A1P02452 RN7SKP280-201ENST00000364196 304 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 RPL32P23-201ENST00000397237 405 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AC025750.1-201ENST00000399891 379 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AC097374.1-203ENST00000400783 485 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 RPL36AP36-201ENST00000418616 301 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.38□□□□□ -1.55
COL1A1P02452 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms