Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 AC098976.1-201ENST00000513014 541 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC053481.3-201ENST00000577881 843 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFBP01127 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC084036.1-201ENST00000609190 508 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 uc_338.7-201ENST00000621834 124 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDGFBP01127 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 BX005019.1-201ENST00000561881 1810 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFBP01127 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 AC092079.1-201ENST00000558620 1985 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC017104.4-201ENST00000636283 1592 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
PDGFBP01127 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PDGFBP01127 RN7SKP224-201ENST00000364140 325 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 RNU6-178P-201ENST00000384631 104 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 U3.28-201ENST00000391249 210 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 ATP5F1P3-201ENST00000397213 657 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 GPS2P1-201ENST00000411761 986 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 ATG4AP1-201ENST00000416893 538 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC244453.4-201ENST00000419150 388 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 UQCRBP1-201ENST00000421129 336 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFBP01127 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFBP01127 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFBP01127 AL354710.1-201ENST00000453641 246 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 AC116562.1-201ENST00000485355 781 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 MTCYBP19-201ENST00000517463 1124 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC136777.2-201ENST00000522979 358 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC060780.2-201ENST00000589047 198 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC022916.3-201ENST00000592961 742 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC068020.1-201ENST00000594215 661 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC130352.1-201ENST00000602979 661 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC090948.2-201ENST00000607363 564 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC005021.1-201ENST00000608730 355 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 AC026367.3-201ENST00000619032 590 ntBASIC4.97□□□□□ -1.61
PDGFBP01127 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.97□□□□□ -1.61
PDGFBP01127 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFBP01127 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDGFBP01127 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFBP01127 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDGFBP01127 AC083843.2-201ENST00000568248 6253 ntBASIC4.96□□□□□ -1.61
PDGFBP01127 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.96□□□□□ -1.62
PDGFBP01127 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PDGFBP01127 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.96□□□□□ -1.62
PDGFBP01127 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 SNORA70C-201ENST00000384538 135 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 RNA5SP397-201ENST00000391323 118 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 ATP5HP3-201ENST00000396994 486 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 GSTA12P-201ENST00000402398 508 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 NCSTNP1-201ENST00000406229 144 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC009237.10-201ENST00000414112 510 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC009237.5-201ENST00000414271 501 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AL590806.1-201ENST00000415818 853 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 RPS29P9-201ENST00000440360 171 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 RPL7L1P1-201ENST00000448259 785 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.96□□□□□ -1.62
PDGFBP01127 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 PSAT1P4-201ENST00000466500 526 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.96□□□□□ -1.62
PDGFBP01127 PCNAP1-201ENST00000505363 709 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms