Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC022133.1-201ENST00000490961 571 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 RPS24P16-201ENST00000497294 392 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC010374.1-201ENST00000503762 1237 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 RNA5SP228-201ENST00000516232 133 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 UBTFL10-201ENST00000528532 562 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 YWHABP2-201ENST00000540201 713 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC025918.2-201ENST00000558683 763 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC006116.3-201ENST00000592968 361 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.56□□□□□ -1.68
LMX1BO60663 AC084373.1-201ENST00000603311 235 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 OR7A19P-201ENST00000608051 733 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LMX1BO60663 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMX1BO60663 MTCO1P7-201ENST00000419523 1542 ntBASIC4.56□□□□□ -1.68
LMX1BO60663 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.56□□□□□ -1.68
LMX1BO60663 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 AC063976.2-201ENST00000425667 3556 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LMX1BO60663 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 RNU6-252P-201ENST00000363232 107 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 RNU1-43P-201ENST00000365052 165 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 RNU6-481P-201ENST00000384194 107 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 RNU6-796P-201ENST00000391086 107 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 HSPA8P15-201ENST00000401676 786 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 RPL5P19-201ENST00000404228 893 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 AL445183.3-201ENST00000414168 502 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.55□□□□□ -1.68
LMX1BO60663 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.55□□□□□ -1.68
LMX1BO60663 MED6P1-201ENST00000439659 713 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 OR10R1P-201ENST00000441524 1141 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 TCEA1P3-201ENST00000443005 880 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.55□□□□□ -1.68
LMX1BO60663 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 RPL7P55-201ENST00000450522 746 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 RPL23AP23-201ENST00000452590 471 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AL389915.2-201ENST00000454576 441 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.55□□□□□ -1.68
LMX1BO60663 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 RN7SL860P-201ENST00000473738 223 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 ENPP7P11-201ENST00000505915 627 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.55□□□□□ -1.68
LMX1BO60663 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 RNU6-319P-201ENST00000516025 108 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 RNA5SP373-201ENST00000517271 95 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.55□□□□□ -1.68
LMX1BO60663 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC022360.1-201ENST00000521058 340 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 HMGB1P40-201ENST00000525121 540 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 AC104229.1-201ENST00000561364 255 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 OR1F2P-201ENST00000570470 933 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.55□□□□□ -1.68
LMX1BO60663 AP000919.1-202ENST00000581139 1264 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC124283.4-201ENST00000581815 456 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC245036.5-201ENST00000596330 847 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 NIFKP6-201ENST00000598115 845 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 TAS2R6P-201ENST00000605022 826 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC011330.2-201ENST00000621680 635 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms