Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC022431.1-201ENST00000450941 438 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 AC079841.1-201ENST00000481228 950 ntBASIC4.73□□□□□ -1.65
SSX4O60224 RN7SL727P-201ENST00000482164 296 ntBASIC4.73□□□□□ -1.65
SSX4O60224 RPS23P1-201ENST00000491662 432 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC072052.1-201ENST00000496556 306 ntBASIC4.73□□□□□ -1.65
SSX4O60224 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 CAB39P1-201ENST00000502277 460 ntBASIC4.73□□□□□ -1.65
SSX4O60224 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.73□□□□□ -1.65
SSX4O60224 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSX4O60224 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.73□□□□□ -1.65
SSX4O60224 AC012616.1-201ENST00000600294 197 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AF129408.1-201ENST00000608767 431 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AL391834.2-201ENST00000609982 546 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC015914.2-201ENST00000618167 288 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 AC009269.6-201ENST00000621778 588 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC093875.1-201ENST00000623688 504 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 AC093311.1-201ENST00000506586 2021 ntBASIC4.73□□□□□ -1.65
SSX4O60224 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.73□□□□□ -1.65
SSX4O60224 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 PWAR1-201ENST00000624188 2414 ntBASIC4.73□□□□□ -1.65
SSX4O60224 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 HSPA8P19-201ENST00000505359 1517 ntBASIC4.72□□□□□ -1.65
SSX4O60224 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 AC007996.1-201ENST00000620414 2821 ntBASIC4.72□□□□□ -1.65
SSX4O60224 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 RN7SKP6-201ENST00000364795 319 ntBASIC4.72□□□□□ -1.65
SSX4O60224 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSX4O60224 SNORA48.4-201ENST00000391089 134 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RNF10P1-201ENST00000418589 369 ntBASIC4.72□□□□□ -1.65
SSX4O60224 VN1R37P-201ENST00000419096 748 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 AL450263.2-201ENST00000439400 589 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC092685.1-201ENST00000447960 1243 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.72□□□□□ -1.65
SSX4O60224 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 RPL7AP52-201ENST00000458096 790 ntBASIC4.72□□□□□ -1.65
SSX4O60224 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RPS18P6-201ENST00000476880 458 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RN7SL826P-201ENST00000479724 288 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RPS21P4-201ENST00000487122 248 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RN7SL591P-201ENST00000496150 292 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.72□□□□□ -1.65
SSX4O60224 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 AC093801.2-201ENST00000503966 1050 ntBASIC4.72□□□□□ -1.65
SSX4O60224 PGAM1P13-201ENST00000507497 754 ntBASIC4.72□□□□□ -1.65
SSX4O60224 MTATP6P9-201ENST00000515039 680 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 OR8G3P-201ENST00000533406 921 ntBASIC4.72□□□□□ -1.65
SSX4O60224 OR11H3P-201ENST00000554547 982 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC006349.1-201ENST00000555526 235 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC126365.2-201ENST00000580630 379 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 AP000769.2-201ENST00000602344 396 ntBASIC4.72□□□□□ -1.65
SSX4O60224 BNIP3P35-201ENST00000604530 490 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 AL118522.2-201ENST00000616045 615 ntBASIC4.72□□□□□ -1.65
SSX4O60224 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX4O60224 AP002505.2-201ENST00000623585 696 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC135068.5-201ENST00000624197 983 ntBASIC4.72□□□□□ -1.65
SSX4O60224 AC017007.4-201ENST00000503353 1352 ntBASIC4.72□□□□□ -1.65
SSX4O60224 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.72□□□□□ -1.65
SSX4O60224 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SSX4O60224 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX4O60224 GTF2H2B-203ENST00000508065 1432 ntBASIC4.72□□□□□ -1.65
SSX4O60224 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX4O60224 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX4O60224 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms