Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SMAD6O43541 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 DDX6P1-205ENST00000441966 1436 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 RNA5SP428-201ENST00000365129 132 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 SNORA2.3-201ENST00000383920 135 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 AL078599.1-201ENST00000402075 293 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AP002530.1-201ENST00000405705 684 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AL390316.1-201ENST00000406279 553 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 RPL12P9-201ENST00000412942 488 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 HIGD1AP15-201ENST00000416198 280 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 XKRYP1-201ENST00000423438 492 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 XKRYP2-201ENST00000432915 492 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.16□□□□□ -1.58
SMAD6O43541 SBDSP1-204ENST00000453858 737 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.16□□□□□ -1.58
SMAD6O43541 NDUFB5P1-201ENST00000508134 564 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 OR7E128P-201ENST00000532736 1024 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 AC022884.2-201ENST00000578535 580 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 MIR4509-3-201ENST00000578671 94 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SMAD6O43541 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SMAD6O43541 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 MIR4509-2-201ENST00000583920 94 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AC022022.2-201ENST00000602989 360 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 AC080013.6-201ENST00000606185 215 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 EIF3FP1-201ENST00000613970 806 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 MIR4509-1-201ENST00000618224 94 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 MIR6730-201ENST00000622213 67 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 AP002791.1-201ENST00000623291 381 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.16□□□□□ -1.58
SMAD6O43541 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.16□□□□□ -1.58
SMAD6O43541 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
SMAD6O43541 GVINP1-202ENST00000531871 7271 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 AL513185.3-201ENST00000433335 1300 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMAD6O43541 HSPA8P17-201ENST00000427029 1382 ntBASIC5.16□□□□□ -1.58
SMAD6O43541 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.15□□□□□ -1.58
SMAD6O43541 AL138820.1-201ENST00000617901 5305 ntBASIC5.15□□□□□ -1.58
SMAD6O43541 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
SMAD6O43541 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMAD6O43541 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.15□□□□□ -1.58
SMAD6O43541 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SMAD6O43541 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 SNORA51.8-201ENST00000384234 132 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 MIR550A3-201ENST00000390735 95 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 RPL22P22-201ENST00000395439 379 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 SETP15-201ENST00000412724 337 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.15□□□□□ -1.59
SMAD6O43541 RCC2P2-201ENST00000422174 918 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.15□□□□□ -1.59
SMAD6O43541 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 HSPE1P16-201ENST00000426640 348 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.15□□□□□ -1.59
SMAD6O43541 VN1R54P-201ENST00000435210 1049 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 MOB1AP2-201ENST00000446060 614 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 TRY2P-201ENST00000448860 689 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.15□□□□□ -1.59
SMAD6O43541 IGHV5-78-201ENST00000450948 295 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 RN7SL244P-201ENST00000493405 297 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.15□□□□□ -1.59
SMAD6O43541 COX6B1P5-201ENST00000509843 249 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AP003355.1-201ENST00000518956 587 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
SMAD6O43541 AC009852.2-201ENST00000567898 485 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms