Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MSI1O43347 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MSI1O43347 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 MFSD8-213ENST00000641134 1327 ntBASIC5.3□□□□□ -1.56
MSI1O43347 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 AC011755.1-201ENST00000623763 2049 ntBASIC5.3□□□□□ -1.56
MSI1O43347 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
MSI1O43347 ZNF29P-201ENST00000225587 168 ntBASIC5.3□□□□□ -1.56
MSI1O43347 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 AC136624.1-201ENST00000400791 413 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AL589647.1-201ENST00000402485 466 ntBASIC5.3□□□□□ -1.56
MSI1O43347 GJA6P-201ENST00000415117 1042 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC017078.1-201ENST00000416146 368 ntBASIC5.3□□□□□ -1.56
MSI1O43347 RPS26P13-201ENST00000419030 330 ntBASIC5.3□□□□□ -1.56
MSI1O43347 RPA2P2-201ENST00000419698 796 ntBASIC5.3□□□□□ -1.56
MSI1O43347 NIPA2P1-201ENST00000426223 976 ntBASIC5.3□□□□□ -1.56
MSI1O43347 FABP5P3-201ENST00000437960 408 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.3□□□□□ -1.56
MSI1O43347 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 EXOSC3P1-201ENST00000448649 500 ntBASIC5.3□□□□□ -1.56
MSI1O43347 RPL7P61-201ENST00000451721 751 ntBASIC5.3□□□□□ -1.56
MSI1O43347 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.3□□□□□ -1.56
MSI1O43347 RN7SL443P-201ENST00000464331 290 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC068587.2-201ENST00000478386 781 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 GOLGA5P1-201ENST00000507317 980 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 RN7SKP260-201ENST00000516907 149 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.3□□□□□ -1.56
MSI1O43347 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.3□□□□□ -1.56
MSI1O43347 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.3□□□□□ -1.56
MSI1O43347 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.3□□□□□ -1.56
MSI1O43347 MTCYBP13-201ENST00000578634 1093 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 AP002802.2-201ENST00000605877 235 ntBASIC5.3□□□□□ -1.56
MSI1O43347 AC245100.7-201ENST00000609678 442 ntBASIC5.3□□□□□ -1.56
MSI1O43347 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MSI1O43347 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
MSI1O43347 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
MSI1O43347 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MSI1O43347 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
MSI1O43347 DDX18P6-201ENST00000450119 1997 ntBASIC5.29□□□□□ -1.56
MSI1O43347 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.29□□□□□ -1.56
MSI1O43347 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MSI1O43347 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 AC112198.2-201ENST00000426589 6996 ntBASIC5.29□□□□□ -1.56
MSI1O43347 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 SMG1P7-201ENST00000565246 2704 ntBASIC5.29□□□□□ -1.56
MSI1O43347 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSI1O43347 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
MSI1O43347 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 SNORA2.3-201ENST00000383920 135 ntBASIC5.29□□□□□ -1.56
MSI1O43347 HMGB1P10-201ENST00000395823 563 ntBASIC5.29□□□□□ -1.56
MSI1O43347 RNU4-74P-201ENST00000411280 161 ntBASIC5.29□□□□□ -1.56
MSI1O43347 UBE2V1P9-201ENST00000414760 368 ntBASIC5.29□□□□□ -1.56
MSI1O43347 SSR1P2-201ENST00000415208 787 ntBASIC5.29□□□□□ -1.56
MSI1O43347 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 PNRC2P1-201ENST00000423940 420 ntBASIC5.29□□□□□ -1.56
MSI1O43347 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MSI1O43347 RPL12P3-201ENST00000440080 396 ntBASIC5.29□□□□□ -1.56
MSI1O43347 OTX2P1-201ENST00000450956 354 ntBASIC5.29□□□□□ -1.56
MSI1O43347 BX842559.2-201ENST00000451418 605 ntBASIC5.29□□□□□ -1.56
MSI1O43347 HMGB1P5-202ENST00000451497 985 ntBASIC5.29□□□□□ -1.56
MSI1O43347 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 AC093720.1-201ENST00000505681 714 ntBASIC5.29□□□□□ -1.56
MSI1O43347 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MSI1O43347 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.29□□□□□ -1.56
MSI1O43347 RN7SKP265-201ENST00000516448 223 ntBASIC5.29□□□□□ -1.56
MSI1O43347 AP001207.2-201ENST00000519490 539 ntBASIC5.29□□□□□ -1.56
MSI1O43347 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 OR8G5-201ENST00000524943 1041 ntBASIC5.29□□□□□ -1.56
MSI1O43347 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.29□□□□□ -1.56
MSI1O43347 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.29□□□□□ -1.56
MSI1O43347 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.29□□□□□ -1.56
MSI1O43347 PRPF19P1-201ENST00000584766 898 ntBASIC5.29□□□□□ -1.56
MSI1O43347 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.29□□□□□ -1.56
MSI1O43347 AC098935.2-201ENST00000604222 466 ntBASIC5.29□□□□□ -1.56
MSI1O43347 AC133644.2-201ENST00000608142 540 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms