Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXN3O00409 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AL592310.1-201ENST00000414330 671 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 SSR1P2-201ENST00000415208 787 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 MTND4P3-201ENST00000417829 541 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 CDY14P-201ENST00000431260 1014 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 MTND2P5-201ENST00000432656 1006 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXN3O00409 GTF2IP3-201ENST00000433887 494 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 CYCSP12-201ENST00000437729 300 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXN3O00409 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 CDY12P-201ENST00000440679 1015 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RPS26P30-201ENST00000443431 335 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AL592437.1-201ENST00000443781 492 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 TPTE2P6-202ENST00000445572 1007 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 CDY13P-201ENST00000445813 1015 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 GAPDHP14-201ENST00000450472 937 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC022431.1-201ENST00000450941 438 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 CDY23P-201ENST00000451661 1014 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC098826.2-201ENST00000452011 651 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC244505.3-201ENST00000454598 187 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RN7SL717P-201ENST00000478343 297 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RPL23AP37-201ENST00000479658 549 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RN7SL814P-201ENST00000487715 300 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 RN7SL184P-201ENST00000488308 297 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC093534.1-201ENST00000504977 132 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC020699.1-201ENST00000505161 445 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXN3O00409 HMGB1P23-201ENST00000518743 568 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXN3O00409 HMGB1P40-201ENST00000525121 540 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC023813.4-201ENST00000607580 580 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AC106052.1-201ENST00000608029 497 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 U6.48-201ENST00000618523 106 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC091932.2-201ENST00000623014 291 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 AP002967.1-201ENST00000624203 539 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AL450345.1-202ENST00000605741 3881 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXN3O00409 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXN3O00409 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXN3O00409 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
FOXN3O00409 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXN3O00409 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXN3O00409 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXN3O00409 RNF6P1-201ENST00000444889 1784 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 AC005294.1-201ENST00000355509 281 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RN7SKP153-201ENST00000365026 316 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 BMS1P3-201ENST00000372011 932 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXN3O00409 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXN3O00409 RNU6-224P-201ENST00000384055 107 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RNU6-906P-201ENST00000384700 70 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 MIR589-201ENST00000385238 99 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
FOXN3O00409 SNORA17A-201ENST00000391185 133 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RNA5SP487-201ENST00000410186 122 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RNA5SP178-201ENST00000410380 128 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 COX5BP7-201ENST00000414780 274 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXN3O00409 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXN3O00409 HMGB3P5-201ENST00000428894 612 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 AC090018.1-201ENST00000434369 367 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 USP9YP24-201ENST00000434374 697 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXN3O00409 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXN3O00409 USP9YP17-201ENST00000444617 696 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 AC068135.1-201ENST00000446164 246 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 MRPL35P2-201ENST00000448009 511 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 MTND2P8-201ENST00000450555 1025 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 AC079168.1-201ENST00000458741 345 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RNU7-140P-201ENST00000459546 60 ntBASIC5.66□□□□□ -1.5
FOXN3O00409 RN7SL515P-201ENST00000463999 297 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms